Pseudomonas sp. HS6: JJN09_12365
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Entry
JJN09_12365 CDS
T09971
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshs03009
]
JJN09_12365
Ribosome biogenesis [BR:
pshs03009
]
Prokaryotic type
ribosomal protein modification factors
JJN09_12365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
UQS17614
LinkDB
All DBs
Position
2740823..2743027
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPGANASASTYIPGKDLPLEQTIANMSGILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGSTKEGALASALGEFIERLNCNFFYNDQFWGLD
LANAPFVHYPDERWFKPGSNDELPSEILDPYCLKIYNRDGELRGSHLIDTNSGNEQRGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPQEVLAKYPAIMAGIQGLEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFEGQAVTEPNNFVEHFIDSSGVVSWRF
FSAQAEYEFVEWDFTGQGENSNVEEAETLFGILKGMGKESYMAVYEHIGATACRILVPDY
SEIYPVDDLIWDNTNKALFFREDILNLHRLNEEELQSLVERLVESELDDYTDITTLIGIE
FDDNTVWGQLTILELKLLIWLALGQIEEAKEAVEMFLQYNDNTVERGLFYQAVNGVLEMQ
LDEDLELADYEANFRRMFGNERMDAAIGSVDGSVRFYGLTPTSMKLEGLDRHLRLIDSYK
KLHAARANVTASVR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtggtggccgaccaaccgatccgctacaagggcgacggctcggcaccgggtccgttc
gactacttcctggcctcgtcggcgctgtgtgcggcttacttcgtgaagctgtattgcgaa
acccgcaatatcccgaccgataacatccgcctgtcgcagaacaacatcgttgacccggag
aaccgctacaaccagatcttcaagattcaggtcgagttgccggcagacatctccgacaag
gaccgccagggcatcctgcgttccatcgaccgctgcaccgtgaaaaaagtggtgcaggcc
ggccctgagttcgtgatcgaggaagtggaaaacctcgacgccgacgcccaggcactgctg
atgccaggcgcgaacgccagcgcgagcacctacattccgggcaaggacctgccgctggag
cagaccatcgccaacatgtcgggcatcctcgccgacctcggcatgaagatcgaaatcgcc
tcgtggcgcaacatcgtgcccaacgtgtggtcgctgcacatccgcgacgcgcactcgccg
atgtgcttcaccaacggcaagggctcgaccaaggaaggcgcgctggcgtcggcgctgggc
gagttcatcgagcggctgaactgcaacttcttctacaacgatcagttctggggtctggac
ctcgccaatgcgccgttcgtgcattacccggacgagcgctggttcaagccgggcagcaat
gacgagctgccgagcgaaatcctcgacccgtactgcctgaagatctacaaccgcgacggc
gaactgcgtggttcgcacctgatcgacaccaactccggcaatgaacagcgcggtatcgtt
tcgctgccgttcgttcgtcagtcggacggcgaggtggtgtacttcccgtcgaacctgatc
gaaaacctgtacctgagcaacggcatgagcgccggcaacaccctggccgaagcccaggtg
cagtgcctgtcggaaattttcgaacgtgcggtgaagcgcgaaatcatcgaaggcgaattc
gccctgccggacgtgccgcaggaagtgttggccaagtacccggcgatcatggccggtatt
cagggcctggaagcccagggcttcccggtgctggtgaaggatgcgtcgctgggcggcgaa
ttcccggtgatgtgcgtcacgctgatgaacccgcgtaccggcggtgtgttcgcttcgttc
ggcgcgcacccgagcttcgaagtggcgctggagcgcagcctgaccgagttgctgcaaggc
cgcagtttcgaaggcctgaacgatctgccgcagccaaccttcgaaggtcaggcggtcacc
gaaccgaacaacttcgtcgagcacttcatcgactccagcggtgtggtgtcgtggcgcttc
ttcagcgcccaggcggaatacgagttcgtggaatgggacttcaccggccagggtgaaaac
tccaacgtcgaggaagccgaaaccctgttcggcatcctcaagggcatgggcaaggaatcg
tacatggcggtctacgagcacatcggtgcaaccgcttgccgcatcctggtgccggactac
tcggaaatctacccggtggacgacctgatctgggacaacaccaacaaggcgctgttcttc
cgcgaagacatcctcaacctgcatcgcttgaacgaagaagaactccagtcgctggtcgag
cgtctggtcgaaagcgagctggatgactacaccgacatcaccacgctgatcggcatcgag
ttcgatgacaacaccgtgtgggggcaactgacgattctggaactgaaactgctgatctgg
ctcgccctgggacaaatcgaggaggctaaggaagcagtggaaatgttcctccagtacaac
gacaacaccgtcgagcgggggctgttctatcaggccgtcaacggggtgctggagatgcaa
ctggacgaagatctggagctggccgactacgaagccaacttccgccgcatgttcggcaac
gaacggatggacgccgcgatcggctcggtggacggcagcgtacgcttctacggcttgacg
ccgaccagcatgaagctggaaggactcgaccgccatctgcgcctgatcgacagctacaag
aaactgcacgcggcccgggccaatgtgacggcttcggttcgctga
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