Pseudomonas sp. HS6: JJN09_12565
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Entry
JJN09_12565 CDS
T09971
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00300
Lysine biosynthesis
pshs00470
D-Amino acid metabolism
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
pshs01120
Microbial metabolism in diverse environments
pshs01230
Biosynthesis of amino acids
Module
pshs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JJN09_12565
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JJN09_12565
Enzymes [BR:
pshs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JJN09_12565
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UQS17652
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All DBs
Position
complement(2783245..2784639)
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AA seq
464 aa
AA seq
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MPELIAPPIKETIETQYPKVLKPLIDPIIDNLLQHSPEKLVELIKQHGSPLNLVWPHSFE
ANVQALQSVLKRHDVDYAIFYGAKANKSQCLLAAASASGIGTDVSSLFELQAALRAGTPA
EHLCATGPAKTAEFHRALVQGGSLICVDSLEEFSHLKALLDTSQPPAKARILLRYRPTSC
PSSRFGMGADDLFQCLQLLTEQRESLHFEGFHFHLGGYGYETRVQAFREVTGFIDAAREM
GLDPVMIDIGGGLPMRYVDPQDYNSFLQNDNNPGHYQNRRVPNAYYPYGSSLTACQWLEL
FLESDHSPGKTIASYLKDRNIKLALEPGRSLVDQAAITVFRVTQTKQLSDKKVVIFAEGS
SFSACETWFSSEYLVDPILITSKESKTVPIQAYIAGHSCLDDDVITHRLINFETTPQTGD
LLIYANTAGYQMDLLENEFHRHPLPQRLMATCCTEGNYAFTPDY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaattgcgccgccaattaaagaaacaatcgaaacccaatacccaaaagtg
ctgaaaccgctaattgaccctattatcgataatttacttcaacattccccggaaaaactt
gttgaacttattaaacaacacggatccccgctgaatctagtatggccacattcatttgag
gccaacgtccaggcgctgcaatcggtgttgaaacgacacgacgttgactacgcgattttc
tacggtgccaaagccaacaagtcccaatgcttgctggctgcggcatcggcttcgggcatc
ggcaccgacgtgtcgagcctctttgagctgcaagctgcactgcgcgccggaactccggcg
gaacatctgtgtgcaaccgggccggccaaaacggcagagtttcatcgtgcgctggtacaa
ggtggatcgctgatttgtgtggactcactggaagagttcagccatctcaaagcgctgctc
gacacttcgcaaccaccggccaaagcccggatcctgctgcgttacaggccgacaagttgc
ccctcaagtcgcttcggaatgggcgcggatgatttgtttcagtgcctgcaattgctgacc
gaacagcgtgagtcgttgcacttcgaaggtttccatttccacctcggcggttacggctac
gaaacccgggtacaggctttccgcgaagtcactggcttcatcgatgcagcaagggaaatg
gggctggacccggtcatgatcgatatcggtggtggcctgccgatgcggtatgtagacccg
caggattacaacagttttttgcagaacgacaacaatcctggtcattatcagaatcgtcga
gtgcccaacgcttattacccttatggcagcagtctgacagcttgccagtggctggagtta
ttcctggagtcggatcactctccgggaaaaaccattgcgagttacttgaaggatagaaat
ataaaactggcactggagcccggccgaagtctggttgaccaagccgccattaccgtcttt
cgcgtaacccaaaccaaacaactgtccgacaaaaaagttgtgatctttgccgaaggcagc
agtttcagcgcgtgcgaaacatggttttcatctgaataccttgtcgatccaatattgatc
acttcgaaagagtcgaagactgttccgatacaagcctatatcgccgggcatagttgcctg
gatgatgatgtgatcactcatcgactgatcaacttcgaaaccacaccacaaaccggcgac
ttattgatctacgccaacaccgctggttatcagatggacttgctggaaaacgaatttcat
cgccacccgttgccgcagcggctgatggcgacgtgttgtacggaaggtaactacgcattc
acacctgactattaa
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