Pseudomonas sp. HS6: JJN09_12840
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Entry
JJN09_12840 CDS
T09971
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pshs
Pseudomonas sp. HS6
Module
pshs_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_12840
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_12840
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JJN09_12840
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
JJN09_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_30
Sec8_N
MarR_2
HTH_Tnp_ISL3
ExbD
TXNDC16_3rd
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
UQS17703
LinkDB
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Position
2839720..2840667
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AA seq
315 aa
AA seq
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MDRFDAMQAFARVVEAGSFTKAAETLHMSKTTVTQLVQQLEARLRVKLLNRTTRKVNVTA
DGAIYYERVLRLLADLDDVETGLGQASAAPRGRLRVDVPSPLARLILIPALPDFHRRYPD
IQIDMGVSDRIVDIIDENVDCVVRGGELLDQSLMARRVADLHLGVYAAPGYLARAGTPAH
PRELEDSHHRVVGFLWARTGKPVPYALRNARENLLIKGRHVLAVDDGNAYLAAGLAGLGV
LWLPRYMSAEHEARGELVALFEGWELDPMPLYVAYPPNRHISRKLRVFIDWVVELMTERA
NGPELAGRALGLSNK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttttgacgcgatgcaggcgttcgcccgggtggtggaggcgggtagcttcacc
aaggccgccgagactctgcacatgagcaagaccactgtgacccagctcgtccagcaactg
gaggcacgcctgcgggtgaaactgctcaaccgcaccacacgcaaggtcaacgtcaccgcc
gatggggcgatttactacgaacgggtgctccggttgctggcggatctggacgatgtcgaa
accggtctcggccaggcttcggcggcgccccgcgggcggctgcgggtggatgtgccgagc
ccgctggcgcgcctgattctgataccggcgttgccagactttcaccggcgttatccggat
attcagatcgacatgggcgtcagcgaccggatcgtcgatatcatcgatgaaaacgtcgat
tgcgtagtgcgcggcggcgagttgctggaccagtcgctgatggcgcgacgggtcgccgat
ctgcacctgggggtgtatgccgcgccagggtatctcgcccgcgccggcaccccggcgcat
ccccgagagctggaagacagccatcatcgggtggtcggttttctttgggcacgcaccggc
aaaccggtgccttatgccttgcgcaacgcgagagagaatctgctgatcaagggccggcat
gtgctggcggtcgatgatggcaacgcctatctggcggcaggcctggccggtctgggtgtg
ctctggctgccccgctacatgtcggcagagcatgaggcccggggtgagttggtggcactg
ttcgaggggtgggagcttgatccgatgccgctgtacgtcgcctacccgccgaaccggcat
atcagccgaaagctgcgggtatttatcgattgggtcgtggagttgatgactgagcgtgcc
aatggcccggaacttgctggtcgcgctctgggactgtcaaataaatag
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