Pseudomonas sp. HS6: JJN09_13265
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Entry
JJN09_13265 CDS
T09971
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_13265
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_13265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
UQS17786
LinkDB
All DBs
Position
complement(2927522..2928883)
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AA seq
453 aa
AA seq
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MPDFPFSRDSAISTLRLIGGCTALGLATCTQAAPAFDSESPYMLGDWNGTRSELSAKGID
FKLDYTGEMGSNLHGGYDHDRTARYSDQWGLGTHLDLQKLLGWNDAEFQLTVTKRSGNNI
SNDRINDPRVGGFTSAQEVWGRGQTTRLTQMWYQQKFFDQKLDIKVGRFGEGEDFNSFPC
DFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVKYHLTPELYAQVGAYEQNPSNLDRGNGF
KLSGSGTQGAILPIELVWTPKLNGLPGEYRAGYYYSNAKATDAYKDSNGQPAALSGEAYR
SASSKHGVWLGVQQQITSVASDNSRGLSVFANGTMHDKKTNAVDNYVQAGVVYKGLFDAR
AKDDIGFALARVHVNPAYRKNAEATNQARAVYDYDDPSFLPPQDTEYSAELYYGVHVTNW
LTVRPNLQYIRHPGGVDKVDDALIGGIKIQSSF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattttccgttctcccgagacagcgctatctcaaccctgcgcctgatcggtggc
tgcaccgcccttggcctcgccacctgcacccaggccgccccggccttcgacagtgaatca
ccgtatatgctcggtgactggaacggcacccgcagcgaactctcggcaaaaggtatcgac
ttcaagctcgactacaccggtgaaatgggcagcaacctgcacggcggctacgaccacgac
cgcactgcacgctacagcgatcaatggggcctcggcacccatctggacctgcaaaaactg
ctgggctggaacgacgccgaattccagttgaccgtgaccaagcgcagcggcaacaacatc
agcaacgaccgcatcaatgacccgcgcgtcggtgggttcacttccgctcaggaagtctgg
ggccgtggccagaccacccgcctgacgcagatgtggtaccagcagaaattcttcgaccag
aagctcgacatcaaggtcggccgcttcggtgaaggcgaagacttcaacagcttcccgtgc
gacttccagaacctggcgttctgtggctcgcaggtcggcaactgggtcggcggcatctgg
tacaactggccggtcagccaatgggcgctgcgcgtgaaatatcacctgaccccggagctg
tacgcgcaggtcggcgcctatgagcagaacccgtcgaacctcgatcgcggcaacggtttc
aaactcagcggcagcggcacccagggcgcgatcctgccgatcgaactggtgtggacgccg
aagctcaacggcctgccgggcgagtaccgcgccggttactactacagcaacgccaaggcc
accgacgcctataaagacagcaacggccagccggcagccctgagcggcgaagcctatcgc
agcgcttcgagcaagcacggcgtgtggctcggcgtgcagcagcagatcaccagcgtcgcc
agcgacaactcccgcggcttgagcgtgtttgccaacggcacgatgcacgacaagaagacc
aacgccgtcgacaactacgttcaggccggcgtggtctacaaaggcctgttcgacgcccgc
gccaaggacgacatcggtttcgccctggcccgcgtccacgtcaacccggcctaccgcaag
aacgccgaagcgaccaaccaggcccgcgccgtctacgactatgacgatccgtccttcctg
ccgccgcaggacaccgaatacagcgccgaactctattacggcgtgcacgtcactaactgg
ctgaccgtgcgcccgaacctgcaatacatccgccatccgggtggcgtggacaaggtcgat
gacgcgctgattggcgggatcaagatccagtcgtcgttctaa
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