Pseudomonas sp. HS6: JJN09_13700
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Entry
JJN09_13700 CDS
T09971
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJN09_13700 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshs03019
]
JJN09_13700 (groL)
03110 Chaperones and folding catalysts [BR:
pshs03110
]
JJN09_13700 (groL)
03029 Mitochondrial biogenesis [BR:
pshs03029
]
JJN09_13700 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshs04147
]
JJN09_13700 (groL)
Enzymes [BR:
pshs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JJN09_13700 (groL)
Messenger RNA biogenesis [BR:
pshs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JJN09_13700 (groL)
Chaperones and folding catalysts [BR:
pshs03110
]
Heat shock proteins
HSP60 / Chaperonin
JJN09_13700 (groL)
Mitochondrial biogenesis [BR:
pshs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JJN09_13700 (groL)
Exosome [BR:
pshs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JJN09_13700 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JJN09_13700 (groL)
Exosomal proteins of breast cancer cells
JJN09_13700 (groL)
Exosomal proteins of colorectal cancer cells
JJN09_13700 (groL)
Exosomal proteins of bladder cancer cells
JJN09_13700 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UQS17870
LinkDB
All DBs
Position
3028883..3030529
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVILEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAVVAELKKLSAPCTDTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELEGALILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGSAKRVTLSKENTIIVDGAGVEGDIQARIAQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALNAIINLKGDNADQDVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGKGNFGYNA
ATGEYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAVADAPKKDGAAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctggttggcgta
aacgtcctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtgatcctc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtcgccaaagaaatc
gaactcgaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgctggtgacggtactaccaccgctaccgttctggctcaatcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gacaaggcgaccatcgctgtcgttgccgagctgaaaaagctgtccgcaccatgcaccgac
actaaagcgatcgctcaggttggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccagagaccatggttgccgagctggaaggcgcgctgatc
ctgctggtcgacaagaagatctcgaacatccgcgaaatgctgccagtactggaagccgtt
gccaaagccggtcgcccactgctgatcgttgccgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgtggcatcgtcaaagtcgcagccgtcaaggctccgggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgccgttctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccactctggaacacctgggtagcgcc
aagcgcgtaaccctgtccaaggaaaacaccatcatcgttgacggtgctggcgttgaaggc
gacatccaggcacgtatcgctcagatccgtgcccaggttgccgagacttcctcggactac
gaccgtgaaaaactgcaagagcgtctggccaagctgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgcgcagccgttgaagaaggcgtggtacctggcggtggcgttgcgctgatc
cgcgctctgaacgcgatcatcaacctgaaaggcgacaacgccgaccaggacgtcggtatc
gctgttctgcgccgcgctgttgaagcaccgctgcgtcagatcgctgccaacagcggcgac
gagccaagcgttgtggtcaacgaagtcaagaacggcaaaggtaacttcggttacaacgcc
gcaactggcgaatacggcgacatgatcgaaatgggcatcctggacccaaccaaggtaacc
cgttccgctctgcaagctgcatcgtcgatcggcggtctgatcctgaccaccgaagccgct
gttgctgatgcaccgaagaaagacggtgctgctggcggcggtatgccagacatgggcggc
atgggcggcatgggcggcatgatgtaa
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