Pseudomonas sp. HS6: JJN09_13860
Help
Entry
JJN09_13860 CDS
T09971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_13860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_13860
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JJN09_13860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_11
SBP_bac_1
TAT_signal
SBP_bac_6
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
UQS17900
LinkDB
All DBs
Position
3066694..3067797
Genome browser
AA seq
367 aa
AA seq
DB search
MGEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRN
IAATFEAKTGAKVIADRTGSTSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPD
LNRIPNLVDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQKEAPDSYAALWDADLAPNIFL
PPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLD
PLVQGKMAEDIFNGPVNAKAIISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRR
YTEIFSS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcacgatctgaacaggcgtcaattcatcaaaaccgtcggcgtggcctcggtg
gctgcggcggccatgagcatgcccttcatccgggccagtgccagcgacacccgctttgcc
ggcaagaccctgcgcctgttgacctggtccgatgacacgggcctcgctgcactgcgcaac
atcgctgcgaccttcgaagccaagaccggcgccaaagtgattgccgaccgcaccggcagc
acctcggaaatggtcgccaaactcaaggccggcggtgatcgtccgcagtacgacatcatc
accctggccggcgttggtgccgaaggtctggccgctgccggactgctggaaaaacccgat
ctcaaccgcattcccaatctggtcgacgtcccggaaaaataccgcaccggggccaacggt
cacggcatcggttacctgctgtggtgcaacagtctggtctacagcacccgcacccagaaa
gaagcgccggacagttacgccgcactgtgggacgccgatctggcaccgaatattttcctg
ccgccgccgaactggaccgaggccatggacctgatcatcatcgccgccaaactggccggt
ggtgacgaacacaacatcgagccgggcttcaagaaactcgcggagttgaaagaccgcgtg
gtgaccctgggcgaaaaccccaaccagatcgccgagctattccgcaccggctccctggac
atgggcggcctgtatgccccggcgtttttccccaagcagatccgcgatccgaactacggc
ctcggcgccacgttcggcatgaaggaaggtttctacaccgacctgatgctctcggtgatg
ccgaagaaccgtccgggcgacaccgacctggcctacgccttcatcgatcactccctcgac
ccgctggtgcagggcaagatggccgaagacatcttcaacggcccggtcaacgccaaggcg
atcatctccgccgaagcgcgcaagagcccgttcatcctcacgccggagcagatcgcggag
aaggcgatcatgcacgacaacgccttcctggcgaccgtgcatgaccagtggattcgtcgc
tacacggaaatcttttcttcctga
DBGET
integrated database retrieval system
