Pseudomonas sp. HS6: JJN09_14060
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Entry
JJN09_14060 CDS
T09971
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_14060
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JJN09_14060
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
AAA_16
DUF87
FtsK_SpoIIIE
ResIII
AAA_30
AAA_10
TrwB_AAD_bind
T2SSE
CbiA
AAA_7
AAA_6
AAA_19
SRP54
Lactamase_B_4
nSTAND3
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
UQS17939
LinkDB
All DBs
Position
3125914..3127401
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AA seq
495 aa
AA seq
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MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLNYKPQAYPVTLWDIHGESGHPLRTTLSEMGP
LLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGEDSALFTT
GSSQALLRRLAILEQQGAEALFGEPALQLEDILQPAADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVG
VYFVTQSPGDLPDNVLAQLGLRVQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTEL
GIGEALVGTLQEKGTPEMVQRVLVAPPQSRIGPLTETERTVLIAGSPFKGRYDKPIDRES
AYEILMGRKGLAPEGEAAPGKPAAEEPSLADKAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcctcgcaactcgttatcggcgccgatctcgccgggcaaccgatcgcccag
gcgatgcgcctggccaaccgacacggactggtggccggcgcgaccggcaccggcaagacc
gtcaccctgcaacggctggccgaagcgttcagcgacgccggggtcgcggtgttcgccgcc
gacatcaagggtgacctgtgcggcctcggtgccgccggcaatccccagggcaaggtcgcc
gagcgcatcgccggcatgccgtggctcaactacaagcctcaggcttatcccgtgaccttg
tgggacattcacggtgaatccggtcatccgctacgcaccacgttgagcgaaatggggccg
ctgctgatcggcgccttgctggaattgaccgatagtcaacagtcggcgctgtacgcggcg
ttcaaggtcgccgaccgcgaaggcctgttgctgctggacctgaaggatcttaaagcgctg
ctcaaccacctcaaggacaacccgcagctgctcggcgaagattcggcgctgtttaccacc
ggctccagtcaggcgctgttgcggcgcctggccattcttgaacagcagggcgccgaagcc
ttgttcggcgagccggcgttgcaactggaagacattctgcaaccggccgccgacggtcgc
gggcgtattcatttgctcgatgcgagtcgtctggtgcatgaagcgccgaaggtctacgcg
acgttcctgctgtggttgctggccgagctgtttgagcaattgccggagcgcggcgatgcc
gacaaaccgttgctggcgctgttttttgacgaagcgcacttgttgttcggcgatacgccc
aaggccctgcaggaacgcctggagcaagtggtgcggctgatccgttccaagggcgtcggg
gtgtatttcgtcacccagtcgccgggcgatttgccggacaacgtgctggcgcaactgggt
ttgcgggtgcagcacggtttgcgagcattcaccgccaaggagcagaaatccctgcgggcg
gtggcggatgggttccggccgaatccggcgttcgatacgttgtcggtgttgaccgaactt
ggaattggcgaggcgctggtcggcaccttgcaggaaaaaggcacgccggaaatggtccag
cgcgtgctggtggcgccgccgcagtcgcggatcgggccgttgaccgagaccgaacgcacc
gtgctgattgccggttcgccgttcaagggccgctatgacaagccgatcgatcgagagtcg
gcctatgagatcctgatgggacgcaaggggctggcaccggagggcgaggccgcgccaggc
aaaccggcggcagaggaaccgagcctggcggacaaggccggtgagtttcttggtactgcc
gcagggcaggcattgaaatcggcgatgcgtcaggcggcgaaccagctgggccggcagttg
gtgcggggattgatgggatcgttgctcggtggcagcaagcgccgttaa
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