Pseudomonas sp. HS6: JJN09_14445
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Entry
JJN09_14445 CDS
T09971
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00061
Fatty acid biosynthesis
pshs00071
Fatty acid degradation
pshs01100
Metabolic pathways
pshs01212
Fatty acid metabolism
pshs02024
Quorum sensing
pshs04146
Peroxisome
Module
pshs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JJN09_14445
00071 Fatty acid degradation
JJN09_14445
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JJN09_14445
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_14445
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pshs01004
]
JJN09_14445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshs04147
]
JJN09_14445
Enzymes [BR:
pshs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JJN09_14445
Lipid biosynthesis proteins [BR:
pshs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JJN09_14445
Exosome [BR:
pshs04147
]
Exosomal proteins
Exosomal proteins of breast milk
JJN09_14445
Exosomal proteins of breast cancer cells
JJN09_14445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UQS18012
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All DBs
Position
3209237..3210925
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AA seq
562 aa
AA seq
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MQPDFWNDKRPAGVPLDIDVGEFKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKMVPAYS
LPQAISFKSALRMGRGLGIKPLKVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLGQFGSDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIGGFI
KELKNWKFSALLGLNTLFVALMDHPDFKTLDFSTLKLTNSGGTALVKATAERWEQITGCR
ITEGYGLTETSPVACTNPYGELSRIGTVGLPVPGTRLKVINDDGVEQPLGERGELCIKGP
QIMKGYWQKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggcgggcgtacccctggacatcgacgtg
ggtgaattcaagtcggtgatcgaggtgttcgagcgttcctgcaagaaattcgctgatcgc
ccggcgttcagcaacatgggcgtgaccctgacctacgccgagctggagcgctacagcgcc
gcgttcgccggttacctgcaagcccacaccgatctggtgccgggggatcgcatcgcggtg
cagatgcccaacgtcctgcattatccgattgccgtgttcggcgcactgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatgcgtcaccagttcaaggac
tccggtgcccgggcgctggtgtacctgaacatgttcggccagaaggtccaggaagtactg
ccggacaccgacattcagtacctgatcgaagcgaagatgggcgacctgatgcccaccgcc
aagggctggctggtcaacaccgtggtcagcaaagtgaagaagatggtgccggcgtattcg
ctgccccaggcgatttccttcaagagcgcgttgcgcatgggccggggcctgggcatcaag
ccattaaaggtcggtctcgacgacatcgctgtcctgcaatacaccggcggcaccaccggt
ctggccaaaggcgcgatgctcacccacggcaatctggtggccaacatgcagcaggttcgc
gcctgtctcggccagttcggcagcgacggtcagccgttgttgcgcgaaggccaggaagtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaattgcatgtgcatg
atggtgtccggcaaccacaacgtattgatcacgaacccgcgtgacatcggcggcttcatc
aaggagctgaaaaactggaagttctcggcactgctggggctcaacacactgtttgtcgcg
ctgatggatcatccggacttcaagacactcgacttctccaccctcaagctcaccaactcc
ggcggcacagcactggtcaaggccaccgccgaacgctgggagcagatcaccggttgccgc
atcaccgaaggctacggcctgactgaaacctcgccggtagcctgcaccaacccgtacggc
gagctgtcacgaatcggcacggtcggcctgccggtgccgggcacccggttgaaagtcatc
aatgacgacggcgtcgagcaacctttgggtgagcgcggcgaactgtgtatcaagggcccg
cagatcatgaagggctactggcagaaacccgaggccaccgccgaggtgctggatgccgag
ggctggttcaagtctggcgacatcgcggtgatcgacccggacggtttcgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctccggtttcaacgtgtacccgaacgaaatcgaa
gacgtggtgatggcccatccgaaagtcgctaactgcgcagtgatcggcgtgccggacgag
cgctccggggaagcggtgaagctgtttgtggtggcgcgggaaaccggcgtgagcctggaa
gagctgaaggcctactgcaaagagaatttcaccgcttacaaggtgccgaaacacatcgtg
ctgcgtgagtcgttgccgatgacgcctgtcgggaaaattctgcggcgggagttgcgcgat
atcgcataa
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