Pseudomonas sp. HS6: JJN09_14525
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Entry
JJN09_14525 CDS
T09971
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_14525
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JJN09_14525
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UQS18028
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Position
complement(3225524..3226555)
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AA seq
343 aa
AA seq
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MTTPKNDKNTRTTGRPTLNEVARLAGVSPITASRALRGVSTVATELVEKVQKAAQELNYV
VNPAARALASAQSHSVVVLVPSLANLLFIDTLEAIHRVLTPKGFEVLIGNFHYSRDEEEN
LLRNYMAYQPRGLLLTGFDRTESSRRMIEASNIPCVYMMELDSAAGVNCVGFSQLSAGET
AAEHLLSRGRKRLAYIGAQLDQRTLLRGEGFRKALQKAGRYDPDLEVLTPRSSSVGLGGE
LFLQLLAAHPDVDAIFFGNDDLAQGALLEALRNGIKIPEQVAILGFNDLPMSEHMVPRLS
SINTPREAIGRRAAEQMLTLMAGNSVARPVEDMGFELKIREST
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccctaaaaacgataaaaacacccgcaccaccggccgtcccaccctcaatgaa
gtcgcccggctggccggggtcagtccgattacggcttctcgcgccttgcgcggggtcagc
actgtcgctaccgaactggtggaaaaagtgcaaaaagccgcgcaggaactcaactacgtg
gtcaaccccgccgcccgcgccctggcctcggcccagagccattcggtggtggttctggtg
ccttcgctggccaacctgttgttcatcgacactctggaagccattcatcgggtgctcacg
cccaagggcttcgaagtgctgatcggcaacttccactattcccgcgatgaagaagaaaat
ctgctgcgcaactacatggcctatcagccacggggtttgctgctgaccggtttcgaccgc
actgaaagttcgcggcggatgatcgaggccagcaacattccctgtgtgtacatgatggaa
ctggacagcgccgccggagtgaactgcgtcggattctcccagctcagcgccggggaaacc
gccgccgaacatttgctgtcccgtggccgcaagcgcttggcatacatcggcgcgcaactc
gatcaacgcaccctgttgcgcggtgaaggctttcgcaaagcactacagaaggccggtcgc
tacgacccggatctggaagtgctgaccccgcgttcatcctccgtgggcctgggcggagag
ctgttcctgcaactgctggcggcgcatccggatgtcgacgcgatcttcttcggcaacgac
gacctggctcagggcgcattgctcgaagcgctgcgcaacgggatcaagatccccgagcaa
gtggcgatcctcggtttcaacgacttgccgatgtcggagcacatggtgccgcgcctgagc
agcatcaacaccccgcgtgaagccatcggccggcgtgcggcggagcagatgctgacgctg
atggccggcaacagcgtggcgcggccggtcgaggacatgggcttcgaactgaaaatccgc
gagagcacctga
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