Pseudomonas sp. HS6: JJN09_15030
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Entry
JJN09_15030 CDS
T09971
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_15030
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JJN09_15030
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_34
DUF6166
Motif
Other DBs
NCBI-ProteinID:
UQS12547
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Position
3320736..3321656
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AA seq
306 aa
AA seq
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MSSRRPDPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLR
LCQRGRAGFSLTEEGREVYQSALQLLSALESFRTEVNGLHQHLRGELIIGLTDNLVTLPH
MRITHALAQLKERGPDVQIQIRMIAPNEVEQGVLDGRLHVGVVPQASALSGLEYQPLYSE
RSLLYCAVGHPLFYVDDKQLDDERLNSQDAIAPTFRLPAEIQAHYQALNCTASASDREGM
AFLILTGRYIGYLPDHYASLWVQQGRLRALKANTRFYDLSLASVTRKGRRPHLVLESFLE
SLAATR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgccgccccgatccactggctcaggtcagtgactttgacattcgcctgctg
cggatttttcgcagcgtggtggagtgcggcggtttctccgcggcggaaaccgtgctcggt
atcggtcgctcggcgatcagccagcagatgagcgatctggaacaacgcctcggcctgcgt
ctgtgccaacgcggccgcgccggtttctccttgaccgaagagggccgcgaggtctatcaa
tcggcgctgcagcttttaagtgcgctggaaagtttccgcaccgaggtcaacggcctgcac
cagcacttgcgcggcgaactgatcatcggcctgaccgacaacctcgtcaccctgccccac
atgcgcatcacccatgcactggcgcagttgaaggagcgtgggccggacgtgcagatccag
atccgcatgatcgcccccaacgaagtcgaacaaggcgtactcgacggacgcctgcatgtc
ggcgtggtgccgcaggccagtgcgctgtcgggactggaatatcagccgctgtacagcgaa
cgttcgctgctttattgcgcggtcggccatccgctgttttatgtcgatgacaagcaactg
gacgacgaacgcctgaacagtcaggacgccatcgcgccgaccttccgtttgccagcggag
atccaggcccactatcaagctctcaactgtaccgccagtgcttccgaccgtgagggcatg
gcgttcctgattctgaccgggcgttacatcggttatctgccagatcactacgccagcctc
tgggtacaacaggggcgactgcgtgcgctcaaggccaacacacgcttctatgatttgagc
cttgcctcggtcacccgcaagggtcggcgcccgcatctggtactggaaagctttctcgaa
agcctggccgcaacgcgctag
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