Pseudomonas sp. HS6: JJN09_15185
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Entry
JJN09_15185 CDS
T09971
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
pshs
Pseudomonas sp. HS6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Amelogenin
Motif
Other DBs
NCBI-ProteinID:
UQS12577
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Position
3354063..3355787
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AA seq
574 aa
AA seq
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MKTQVWCKSATALALILSLGLSGCSSGGGGHHSTSGSSSPDSAAAGTGGTGATGGTGDTA
GTGGTGGTGSTGGTGNTGGTGGTGGNGTAGTGGTGGTGGTNPTNPTNPTNPTNPTNPTNP
TNPTDPTNPTNPTTPSLVTTTLVQDVGKTVSGVGDGVSQVGDSLSTVPVVGGVVQSVANT
AGNVVGTLGDGVSNGIGKLASTPNGLGVTASSVGGVVQDVGNGVSDVSGKLATATGSIPV
VGGVVTKVAPLLDGVGEKVTMLGDTLSTATTTGPLGGLTTQVSQKLVPVIAMVESTTDKL
GSATGLGAPLNGVIQKVGGTVDGLGDKVTGAGNGNALTNTLGGALSNVGTTVGKAGGLVA
NGTGGDSGGIGGGLGGTGLLQTVGGAVANVGSGLAAGNGSLNAPGNVLVSAGNTVASLNT
AVGGPGTTITAPTMALANVGNVVGTGLSPVTSAATSLTQNVGNATGLGGPVAGLTAQVGG
AVSNLGGTLAGSTTNPVVTAVGGTVGTVGNTVTAVGGLLNGGAGTPATNPVTTVVSNTVN
AVGGVLGGATNGGTGTGLGGVLGGLTGALGGNKR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcaagtgtggtgcaaatcggcaacagcgctggcattgattctttctctcggt
ctctccggttgcagcagcggtggtggcggccatcacagtacgtccggcagctcttctcca
gacagtgccgctgcgggtacgggcggtacgggcgcaactggcggcaccggcgatacggct
ggcactggcgggacgggaggcaccggcagcaccggtgggactggcaacaccggtgggacc
ggaggcaccggcggtaatggtacggctggcactggcggaaccggtggcactggcggcacc
aacccgaccaatccgaccaatccgacaaacccgaccaatccaaccaatccaaccaacccg
accaatccaacggatccgacaaatccaaccaatcccaccactccttcgctggtgacgacc
accctggtacaggatgttggcaagaccgtcagcggtgtgggtgatggtgtcagccaggtt
ggcgactccctcagcacggttccggtggtgggaggtgtggtgcaaagcgtcgccaatacc
gccggcaatgtggtcggcacgctgggggatggtgtgtccaacggcatcggcaaactggcc
agcaccccgaatggcctgggtgtgaccgcatcgtcggtcggcggtgtggtgcaggatgtc
ggcaacggtgtgtcggatgtcagcggcaagctggcgacagccaccggcagtattccggtg
gtcggcggggtcgtgaccaaagttgcgccactgctcgacggcgtcggcgagaaagtcacc
atgctgggcgacaccctcagtaccgccacgaccaccggaccgctcggcggactcaccacg
caggtcagtcagaaactggtgccggtgattgcgatggttgaaagcaccaccgacaaactc
ggtagcgccaccggtctcggcgcgcccctcaacggcgtgatccagaaagtcggcggtacc
gtagacggcctcggtgacaaagtgaccggcgctggcaacggtaatgccctgaccaacacg
ctgggcggcgcgctgagtaatgtcggcaccacggtcggcaaggccggcggactggtggcc
aacgggactggcggggactcgggcggcatcggcggtggcctcggaggcaccggtctgctg
caaacagtcggcggggccgtggccaatgtcggttccggtctggcggcaggtaatggttcg
ctgaacgctcctggcaatgtgctggtgtcggcgggcaacactgtggcctcgctcaatact
gctgtcggtggtccaggtacaacgatcacggcacccaccatggcgctggccaatgtcggc
aatgtcgtcggcacgggcctgagccctgtgaccagcgcagccaccagcctgacgcaaaac
gtcggcaacgccaccgggctcggtggtccggtcgccggcctgacagcgcaagtgggcggc
gccgtgagtaatctgggtggcaccctcgctggcagcacaaccaatccagtggtcactgcg
gtcggaggtactgtcggcacggtgggcaacactgtgaccgccgtcggtggcctgctcaac
ggcggtgccggcacccccgccaccaatccggtcaccactgtggtcagtaacacggtcaat
gccgtcggcggagtgctcggtggtgccaccaatggcggcaccggcacaggtctgggcggg
gtcctcggcggcctgaccggcgctctgggcggcaacaaacgctga
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