Pseudomonas sp. HS6: JJN09_15910
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Entry
JJN09_15910 CDS
T09971
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JJN09_15910 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshs03019
]
JJN09_15910 (orn)
03009 Ribosome biogenesis [BR:
pshs03009
]
JJN09_15910 (orn)
Messenger RNA biogenesis [BR:
pshs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JJN09_15910 (orn)
Ribosome biogenesis [BR:
pshs03009
]
Eukaryotic type
Pre-60S particles
RNases
JJN09_15910 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UQS12714
LinkDB
All DBs
Position
complement(3524645..3525187)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPENDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaatctgatctggatcgacctggaaatgaccggtctggacccggaa
aacgacgtcatcatcgaaatggccaccatcgtcaccgacagtgacctgaacactctggcc
gaagggccggtgatcgccattcaccacagcgacgaagtgctggcccgcatggacgaatgg
aacacccgcacccacggcaactccggcctgacccagcgcgtacgcgacagtcgcgtgagc
atggccgaggctgaagccgaaaccatcgccttcctcgagcagtgggtgccgaagggcaag
tcgccgatctgtggcaacagcatctgccaggatcgccgcttcctctatacccacatgaag
tcgctggaaagctatttccactaccgtaacctcgacgtttccaccctcaaggagctggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcagcactcacctggcactg
gacgacatccgtgaatccatcgccgagctgcagcactaccgcaagcatttcatcaagttc
tga
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