Pseudomonas sp. HS6: JJN09_17085
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Entry
JJN09_17085 CDS
T09971
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00541
Biosynthesis of various nucleotide sugars
pshs01100
Metabolic pathways
pshs01250
Biosynthesis of nucleotide sugars
Module
pshs_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JJN09_17085 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pshs01005
]
JJN09_17085 (kdsB)
Enzymes [BR:
pshs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
JJN09_17085 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pshs01005
]
Lipid A
JJN09_17085 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
ETF
DUF2064
NTP_transferase
PALP
adh_short_C2
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
UQS12940
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Position
3798347..3799111
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AA seq
254 aa
AA seq
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MTTAFTVVIPSRYASTRLPGKPLLDIAGKPMIQHVWEQASKSSASRVVVATDDARIVEAC
KAFGAEVVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAA
HTEARMATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAKTRDVLPEG
VPYRRHIGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVD
TAEDLERVRRLLEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccttcaccgttgtcatcccgtcgcgctacgcctcgacccgtctgccgggc
aaaccgctgctggacatcgccggcaagccgatgatccagcacgtctgggaacaggcgagc
aaaagcagcgccagccgtgtggtcgtggccaccgacgatgcgcgcatcgtcgaggcctgc
aaggccttcggcgccgaagtggtgctgacccgtgaagatcacaactccggcaccgaccgc
ctggcggaagtggctgcgaagctgggccttgagccggatgccatcgtggtcaacgtgcag
ggtgacgaaccgctgatcccgccaagcgtgatcgatcaggtcgccgctaatcttgcggcc
cacaccgaggcgcgcatggccaccctggccgagccgatcgaggacgtggaaaccctgttc
aacccgaacgtggtcaaggtcgtcagcgacctcaacggtctggcgctgaccttcagtcgt
gcgacgttgccgtgggctcgcgatgcgttcgccaagacccgcgacgtgctgccggaaggc
gtgccgtatcgccgccacatcggcatctatgcctaccgcgcaggcttcctccaggacttc
gtgagctggggcccgtgctggctggaaaacaccgaatccctcgaacagttgcgtgccctg
tggcacggcgtgcggattcatgtggctgacgcgttgatcgcgccgccgaccggggtcgac
accgccgaagacctcgagcgcgtccgtcgcctgttggaggcctga
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