Pseudomonas sp. HS6: JJN09_17595
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Entry
JJN09_17595 CDS
T09971
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshs03032
]
JJN09_17595 (gyrA)
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_17595 (gyrA)
Enzymes [BR:
pshs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JJN09_17595 (gyrA)
DNA replication proteins [BR:
pshs03032
]
Prokaryotic type
DNA Topoisomerases
JJN09_17595 (gyrA)
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JJN09_17595 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UQS13038
LinkDB
All DBs
Position
3905524..3908307
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AA seq
927 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVDLEAMKRQADEEEAEGAEADVE
EIENSNETEEERKARIKAADRKKAPFIFMSTANGTVKKTPLVAFSRQRSVGLIALELDEG
DILISAAITDGEQEIMLFSDGGKVTRFKESEVRAMGRTARGVRGMRLPEGQKLISMLIPE
EGSEILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVQDGEEIMLIS
DQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERVQEPSEVEGEEFEGEEGVELE
EGVIGAEPDDAVDNLQADAADEEESQD
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tatctcgattacgcgatgagcgtgatcgtcggccgtgcactgccggatgcgcgcgatggc
ttgaagcccgtgcaccgtcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgtcgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgtccgtatggcgcagccattctcgctgcgttat
ctgctggtggacggtcagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgagctgatcccggcggtcatgccg
acccgcgtgccgaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcaatacattcccggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggccgcggccgcatt
tacatgcgcgcccgttcgatcatcgaagacatcgacaaggtcggtggtcgtcagcagatc
gttatcaccgagctgccttaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtaaaagagaagaaactcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggtatgcgcgtcgtgatcgagctgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaatcggtattcggcatcaacatcgttgcgctgatcgat
ggccgtccacgcatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgtcgc
gaagtcgtcacccgccgaaccgtgttcgaactgcgcaaggctcgtgagcgtggtcacatc
ctcgaaggtcaagcggtagccctgtcgaacatcgacccggtgatcgccctgatcaaggct
tcgccgaccccgtcggaagccaaggaagcgctggtcagcacgccgtgggaatcctcggct
gtggttgcgatggttgagcgtgccggtgccgattcgtgccgcccggaaaacctcgatccg
caatacggtctgcgtgaaggcaagtacttcctgtcgccggaacaggcgcaagccattctg
gaactgcgtctgcaccgtctgaccggcctggaacacgaaaaactgctggccgagtatcaa
gagattctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgattcgcgctgaatacggcgacgtgcgccgcacc
gagattctcgatgcgcgcctcgacctgaccctgggcgacatgatcccggaagaagagcgc
gtcgtgaccatctcccacggcggttatgccaagacccagccactggctgcgtaccaggct
cagcgtcgtggtggtaaaggcaaatcggctaccggcgtgaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgttgctgttctccagtaagggcaaggtg
tactggctcaagacctacgagattccggaagcgtcccgcgccgcccgtggccgtccgctg
gtcaacctgctaccgctggatgacggtgaatacatcaccaccatgctgccggtcgatctc
gaagccatgaagcgtcaggctgatgaagaagaagccgaaggcgccgaggctgatgtagaa
gaaatcgaaaacagcaacgaaaccgaagaagagcgcaaggcgcgtatcaaggctgccgac
cgcaagaaggcaccgttcatcttcatgtcgaccgccaacggtaccgtcaagaagaccccg
ctggtcgccttcagtcgtcagcgcagcgtcggtctgatcgcgctggagctggacgaaggc
gacatcctgatctccgctgccatcaccgatggcgagcaggaaatcatgctgttctccgac
ggcggcaaggtgacgcgcttcaaggaatccgaagtccgcgccatgggtcgtaccgctcgc
ggtgtgcgtggtatgcgtctgccggaagggcagaagctgatttccatgctgatcccggaa
gaaggcagcgagatccttacggcttccgagcgcggttacggcaagcgcacggcgattacc
gagttccctgaatacaagcgtggcggtcagggcgttatcgccatggtcagcaacgagcgt
aacggccgtctggtcggcgcggttcaggtgcaggatggtgaagagatcatgctgatctcc
gaccagggcacgctggtgcgtacccgtgtcgacgaagtctccagtctgggtcgtaacacc
cagggcgtgaccctgatcaaactggccaaggatgaaactctggtcggtctggagcgggtc
caggagccgtcggaagtcgagggtgaagagtttgaaggtgaagaaggtgtcgagctggaa
gaaggcgtgatcggcgccgagccggacgatgcagtcgacaacctgcaggcggacgccgca
gacgaagaagagtcgcaagactaa
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