Pseudomonas sp. HS6: JJN09_17890
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Entry
JJN09_17890 CDS
T09971
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshs01002
]
JJN09_17890
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_17890
Peptidases and inhibitors [BR:
pshs01002
]
Cysteine peptidases
Family C82
JJN09_17890
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JJN09_17890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
UQS13094
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All DBs
Position
3972217..3973188
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AA seq
323 aa
AA seq
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MLPRFPAVTRCLSLAALCVAGPVAALEFPLPPPGEDIIGQVQVIKAKYEDTFADLGTTYD
LGYSEMVAANPGVDAWLPGAGTEVVLPTRFILPPGPREGIVINLAEYRLYYYPKGRNVVY
TFPLGIGREGWGSPIAHTTITAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRILNDAYKFG
RSGGKVYLEAHTPIDDKGNPSVVDKHTAVINAMLKREDITNNLRMNWDVVRDVVAAEDGL
PTEIGTPNTSAPIVSSAPIDLQQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgctttcctgccgtcacccgctgcctgtctcttgccgccctgtgtgtggcc
ggccccgttgccgcattggagtttcccctgccaccacctggtgaagacatcatcggccag
gtgcaggtgatcaaggccaagtacgaagacacctttgccgatctgggcaccacctacgat
ctgggctattcggaaatggttgcggccaacccgggcgtcgatgcctggttgccgggtgcg
ggcaccgaagtggtcctaccgacccgtttcatcctgccgccgggcccgcgtgaaggcatc
gtgatcaacctcgccgaataccgcctctactactacccgaaaggccggaacgtggtgtac
accttcccgctgggtatcggtcgtgagggctggggctcgccgattgcccacaccacgatc
accgccaagacgccgaatccgacctggacaccgccagcctcgatcaaggcagaacacgcc
gccgatggcgatccgctgccgaacgtcgtgccggccggtccggacaacccgctgggcccg
ttcaagttcaccctgggtacaccgggttacctgatccacggttcgaacaagaagttcggc
atcggcatgcgcaccagccacggctgcttccgcatgttcaacaacaacgtgctggaaatg
gccggcatggtgccggtgggcacgtcggtgcggatcctcaacgatgcgtacaagttcggt
cgcagtggcggcaaggtctacctggaagcgcacacgccgatcgacgacaagggcaacccg
tcggtggtcgacaagcacaccgccgtgatcaacgcgatgctcaagcgtgaagacatcacc
aacaacctgcgcatgaactgggatgtggtccgtgatgtagtcgcagcggaagacggcttg
ccaaccgaaatcggcacgccgaacacctcggcgccgatcgtctccagcgcaccgatcgac
ttgcagcagtaa
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