Pseudomonas sp. HS6: JJN09_19185
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Entry
JJN09_19185 CDS
T09971
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_19185
03036 Chromosome and associated proteins [BR:
pshs03036
]
JJN09_19185
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JJN09_19185
Chromosome and associated proteins [BR:
pshs03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JJN09_19185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
NirdL-like_HTH
HTH_11
GntR
HTH_47
HTH_20
HTH_Tnp_Tc3_2
DDRGK
LexA_DNA_bind
DUF7343
DUF6262
HVO_A0114
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UQS13337
LinkDB
All DBs
Position
4248951..4249439
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AA seq
162 aa
AA seq
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MRTNTQTKRELDKIDRNILRILQADGRISFTELGEKVGLSTTPCTERVRRLEREGIIMGY
NARLNPQHLKGSLLVFVEISLDYKSGDTFEEFRRAVLKLPHVLECHLVSGDFDYLVKARI
SEMASYRKLLGDILLKLPHVRESKSYIVMEEVKESLSLPIPD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactaacactcagaccaaacgtgagctggacaagatcgaccgcaacatcttgcgg
atcctgcaggcggacgggcggatttcattcaccgaactgggcgagaaggtcgggctctcc
accaccccgtgtactgagcgggtgcggcgcctggagcgcgaggggatcatcatgggctac
aacgcccgcctgaatccgcagcacttgaagggtagtctcttggtgttcgtcgagatcagc
ctcgattacaaatccggcgatactttcgaagagttccgacgcgcggtgctgaagttgccc
cacgtgctggaatgccacctggtgtcaggggatttcgactatctggtgaaggcgcggatt
tccgagatggcctcgtaccgcaagctgctgggcgacatcctgctcaagctgccgcacgtg
cgtgaatccaagagctacatcgtgatggaagaagtgaaagagagcctgagcctgccgatt
ccggactga
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