Pseudomonas sp. HS6: JJN09_19495
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Entry
JJN09_19495 CDS
T09971
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JJN09_19495 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshs02044
]
JJN09_19495 (tssK)
Secretion system [BR:
pshs02044
]
Type VI secretion system
Imp/Vas secretion system core components
JJN09_19495 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UQS13394
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Position
complement(4312612..4313943)
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNMPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYETEVADSNAGDDSASQVKCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLGHRGDTIAERIRSNGKVGGAEIGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYSHADQGASFRKL
MESIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRNR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccataaagtcatctggcaggaaggcatgctgctgcgtccgcagcacttccag
cacaacgaccgctactacgatcaccagatgaagacccgcacccaattgctgggcggctac
acctggggtttcctgaatcttgagatcgacttgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggatcctgccggacggcagcctgttcgagctcggtggcaacacc
gaaccgctggcactggacgtgccgccgaacaccggcaacatgccgatttacctggcgctg
ccgctggtcaccggtaaccacatcgaggcccgtcgcccggagcagtccgacgtgctggcg
cgctacacagcctatgaaaccgaagtggccgactccaacgccggcgacgattccgcgagc
caggtcaaatgcggtcgcccggacttcaagctgttgctcggcgagcaacagagcgaccag
gcctacgtgaagctgaagatctgcgacgtgctcgacaccacgccggacggcgtgatcagc
ctcgacccggatttcgtgccgacctacattcaggcccacgcttccagctacctgctgtcg
tgcctgaaagaagtgatcagcatgctcggtcaccgtggcgacacaattgccgagcgtatt
cgttcgaacggcaaggtcggcggcgcggaaatcggcgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgccattacttgggcctggagcaggttcacccggaagag
ttgtatcgcacgctgctgaccatgctcggcgatctggcgaccttctccagcgacagcaaa
cgcccgcgtctggacagccgttactcccacgccgaccagggtgcgagctttcgcaaactg
atggagtcgatccgtcaggtgctgtcgatggtgctggaacagcacgccatcgaactgatc
ctgcaggcgcgtcagtacgggatcatcgtgtcgccgctgcacgaccacaaactgctgggc
tcggcgtcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgcaaccgc
ttgcctgcgcacctcaaggtcggcccggtggagcgcatccgtcaactggtcaacctgcac
ctgccggggatcaaggtcaaaccgttgccggtggcgccgcggcagatcgcgtttcattcg
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggcttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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