KEGG   Pseudomonas sp. HS6: JJN09_19530
Entry
JJN09_19530       CDS       T09971                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pshs  Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:pshs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pshs02044]
    JJN09_19530 (tssF)
Secretion system [BR:pshs02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JJN09_19530 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UQS13401
LinkDB
Position
complement(4321075..4322862)
AA seq 595 aa
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELSHSLMQLLWPNYMRPLPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRF
RTCYPTEVMAMDLAALNYSVKGDGSLLSLRLEMSADGHLGELELSKLRLHFAGERYISQM
LYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLD
NVKLFCTPIVNLFKHDALPIRLDGKQDEYLLLPAEFDLENCGVFSVETVTGWKPGGLGYQ
EYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELVCT
NQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKLIKHHHVDRLHRGLPVRGLRTELTID
PEGYIGEGDLFVFASVLNEFFALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgtcctttaaccactactaccaaagcgaactcaccgcactgcgccaactgggccgccgt
ttcgccgagcgtagtccggcgttggcgccgttcctggggcaggccgggcgggatccggat
gtggagcggttgctggaaggctttgcgtttctgaccgggcggctgcgccagaagctcgat
gacgagttgccggagctcagccattcgctgatgcagttgctgtggccgaactacatgcgc
ccgctgccggcgttcagcattctgcagttcgatccgctgaaacgctcggggccggcgctg
aaggtcgagcgtgatacgccgatcgagagcgtgccgatcgaagacgtgcgttgccgcttc
cgtacctgctacccgaccgaagtcatggcgatggatctggccgcgctgaactactcggtg
aagggtgacggttcgctgctcagcctgcgcctggagatgagtgccgacggccacctcggc
gagctggagctgagcaagctgcgcctgcactttgccggcgagcgctacatcagccagatg
ctctacctgagcctgttgcgcaacctcgacggcatcgaactgattccgctcgacggcgcc
ggcaagcctatcgatggtgtgagcggcaaaccgatggcgttcaagattccgggcgaccgt
gtcaaacctgtgggctttgccgaagaagaagcgttgatcccgtatccgctgaacaccttc
cggggctatcgctacctgcaggaatacttcgccttccaggacaagttcctgtttgtcgat
gtccatggcctggacatcctcaaggcgctgccggaagacaccctcaagcagatgcgcggc
ctggaattgcgcttcgatatccgcaagagcggcatcatgcgcatgcgtccgaccctggat
aacgtgaagctgttctgcacaccgatcgtcaacctgttcaagcacgacgcactgccgatt
cgcctcgacggcaagcaggacgaatacctgctgctgccggcggaattcgatctggaaaac
tgcggtgtgttctcggtggaaaccgtgactggctggaagcccggcggcctcggttatcag
gagtacgtgccattcgaatccttcgagcacgacccgagcttcgacgtgcccaacagccgt
ccgcattacagcatccgccagcgctcgtcgctgctgcacgacggcctcgacacttatttg
agcttcggcatccgccacaccgaagcccatgaaaccctgtcgatcgaactggtctgcacc
aaccagaacctgccgcgcaaactcaagctcgggcagatctgcatggcctgcgaagagacc
ccggagttcctgagtttccgcaacatcacccccgccacttcgagttttgcgccgccgctg
aaccgtgacttcctgtggaagctgatcagcaacatgtcgctcaactatctgtcgctggcc
gacgtcaatgcactgaaggtgattctcgaaacctacgacctgccgcgctactacgaccag
cacgcggagaaggtcagcaaacgcctgttgggcggtctgaaactgatcaagcatcaccac
gtggaccggttgcaccgtggtctgccggtgcgcggtttgcgcaccgaactgaccatcgac
ccggaagggtatatcggtgagggcgacctgttcgtctttgcctcggttctcaacgagttt
ttcgcgctttacgccagtctcaattcattccacgagctgcgggtaaaaagcacacaggga
gaggtgtaccaatggacaccacgtatgggcctgcagcccctgctttaa

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