Pseudomonas sp. HS6: JJN09_20215
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Entry
JJN09_20215 CDS
T09971
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_20215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_20215
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JJN09_20215
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
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Motif
Other DBs
NCBI-ProteinID:
UQS13533
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All DBs
Position
complement(4475929..4476753)
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AA seq
274 aa
AA seq
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MLSPYMSPVERVWFYSLRILCGLILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLHWYQD
FFASAEWMRSLKNSIIVAPAATVLAMVFGTLAAIGLTRGDFPGKALVMALVISPMVVPVV
IIGVASYLFFAPLGLGNSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASP
LTTFRRVTLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPT
IAAAATLLIAFSVILLLTLEWLRGRSEKLRTAQV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtccttatatgtcgcccgtcgagcgggtgtggttctacagcttgcggattctc
tgcggcttgatcctgttgttcctgatcctgccggtgctggtgatcgtgccgctgtcgttc
aactcgggcagtttcctggtgtacccgctgcaaggtttctcgctgcactggtatcaggac
ttcttcgcctcggcggaatggatgcgctcgctgaagaacagcatcatcgtcgccccggcg
gcgacggtgctggcgatggtgttcggcacgctggcggccatcggcctgacccgtggcgac
ttccccggcaaggcgctggtgatggcgctggtgatttcgccgatggtggtgccggtggtg
atcatcggcgtggccagttacctgttcttcgcaccgctgggcctgggcaacagtttcttt
tcgctgatcgtggtgcacgctgtgctcggcgtaccgttcgtgatcatcaccgtgtcggcg
accttgcaagggttcaaccataacctggtgcgggcggcggccagcctcggcgcctcgcca
ctgaccacgttccgtcgggtgaccttgccgttgattgcgcccggggtgatttcgggggcg
ttgtttgcctttgcgacttcgtttgatgaagtggtggtaacgctgtttcttgccgggcct
gagcaggcgacgttgcctcggcagatgttcagcgggattcgcgagaacctgagtccgacg
attgcggcggctgccacgttgttgattgctttctccgtcatcctgctgctgacactggaa
tggctacgcggccgcagcgaaaaactgcgtactgctcaggtttaa
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