Pseudomonas sp. HS6: JJN09_20220
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Entry
JJN09_20220 CDS
T09971
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_20220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_20220
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JJN09_20220
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Orai-1
Motif
Other DBs
NCBI-ProteinID:
UQS13534
LinkDB
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Position
complement(4476766..4478013)
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AA seq
415 aa
AA seq
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MAIAVPLNEGNSPTLKQKLKRAERVNRWKAQALIAPLVLFLLLVFLVPIVALLYKSVGNP
EVVGGMPRTVAAIASWDGRGLPAEPVYKAAGEDLAEARKNQTLGDLSKRLNMELAGYRSL
LTKTARSLPFASEPASYKEALEGLDERWGDPAYWQAVKRNTSSITPFYLLAAVDHRIDDL
GELAPATPDQAIYLDIFARTFWMGLIITVICLVLAYPLAYLLANLPSRQSNLLMILVLLP
FWTSILVRVAAWIVLLQSGGLINSALMAMGVIDKPLELVFNRTGVYISMVHILLPFMILP
IYSVMKGISPTYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALL
GSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATVVLYLIYSWLVGASRLRLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgccgttcccctgaacgagggcaacagccccaccttgaagcagaagctcaag
cgcgccgagcgggtcaaccgctggaaggcccaggcgctgatcgcgccgctggtgctgttt
ctgttgctggtgttcctggtgccgatcgtggcgctgctctacaaaagcgtcggcaacccg
gaagtcgtgggcggcatgccacgcaccgtggcagccatcgccagttgggacggtcgcgga
ctgcccgctgagccggtctacaaagccgccggcgaagacctcgccgaagctcgcaaaaac
cagaccctgggcgatctgtccaagcgcctgaacatggagttggccggctatcgcagcctg
ctgaccaaaaccgcccgctcgctgccattcgccagcgaaccggcctcttataaagaagcg
ctggaaggcctcgacgaacgctggggcgatccggcctattggcaggccgtgaagcgcaat
accagcagcatcacaccgttctatctgctggcggcggtggatcatcgtatcgacgatctc
ggcgaactggccccggccaccccggatcaggcgatctacctcgacatcttcgcccggacc
ttctggatgggcctgatcatcaccgtgatctgcctggtgctggcgtatccgctggcctac
ctgctggccaacctgccgtcgcgtcaaagcaacctactgatgattctggtgctgttgccg
ttctggacttcgattctggtgcgggtcgccgcgtggatcgtgttgctgcaatccggagga
ttgatcaacagcgccttgatggcgatgggcgtgatcgataaaccgctggagctggtgttc
aaccgcaccggggtctacatctcgatggtgcacatcctgctgccgttcatgatcttgccg
atctacagcgtgatgaaaggcatctcgccgacttacatgcgcgccgcgatttccctcggt
tgccatccgttcgccagtttctggcgggtgtatttcccgcagacctatgccggtgtcggc
gccggttgcctgttggtgttcatcctcgccatcggctactacatcaccccggcgctgctc
ggcagcccgaacgatcagatggtcagctacttcgtcgcgttctacaccaacaccagcatc
aactggggcatggccaccgcgcttggcgggctgttgctgctggcgaccgtggtgctttat
ctgatctacagctggctggtgggcgccagtcgcctgcgcctgagctaa
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