Pseudomonas sp. HS6: JJN09_20810
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Entry
JJN09_20810 CDS
T09971
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJN09_20810 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_20810 (choW)
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
JJN09_20810 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF3464
Motif
Other DBs
NCBI-ProteinID:
UQS13648
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All DBs
Position
4616306..4617151
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AA seq
281 aa
AA seq
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MLIDQKIPLGQYIAGFVEWLTQHGASTFDAIAVTLETMIHGVTFALTWFNPLVLIGLIAL
LAHFIQRKWGLTAFVIASFLLILNLGYWQETMETLAQVMFATLVCVVIGVPLGIVAAHKP
MFYTLMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
EELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPDAKVGGDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgatcagaaaatccctttaggccagtacatcgcgggcttcgttgaatggttg
acgcaacacggcgccagcaccttcgacgcaatcgccgtgaccctggaaacgatgatccac
ggcgtgacgtttgcgctgacctggttcaacccgctggtgttgatcggcctcatcgctctg
ctcgcgcatttcattcaacgcaaatggggcctcaccgccttcgtgatcgcctcctttctg
ctgatcctcaacctggggtactggcaggaaaccatggaaaccctagcccaggtcatgttc
gcgaccctggtctgcgtggtcatcggcgtgccgctgggcatcgtcgccgcgcacaaaccg
atgttctacactttgatgaggccggtgctcgatctgatgcagaccgtaccgaccttcgtt
tacctcattcctaccctgaccctcttcgggttgggcgtggttccgggcctgatctccaca
gtggtgttcgccatcgctgcgccgatccgcctgacctacctgggcatccgcgatgtcccg
gaagaactgatggacgccggcaaggccttcggctgctcgcgtcgccaactgctttcacgg
atcgaactgccccacgccatgccaagcatcgcggccggcatcacccagtgcatcatgctg
tcgttgtcgatggtggtgatcgcggcactggtgggcgccgacggactcggcaaaccggtg
gtcaacgcactgaacactgctgatatcgccctgggcttcgaagcgggcctggcgatcgta
ctgctggcgatcatgctcgaccgtatctgcaaacaacccgacgcaaaagtagggggtgac
gcatga
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