Pseudomonas sp. HS6: JJN09_21270
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Entry
JJN09_21270 CDS
T09971
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshs03021
]
JJN09_21270 (rpoH)
Transcription machinery [BR:
pshs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JJN09_21270 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UQS13738
LinkDB
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Position
complement(4713537..4714391)
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AA seq
284 aa
AA seq
DB search
MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcgtatgcattggttccgggcgcaaacctggaagcctat
gtacacaccgtcaacagcattccattgctgacgccggagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacacattgcccgtagctattccggctacggtctggctcaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggccgtgaagcgcttcaacccggaaatgggcgtg
cgtctggtgtccttcgcggttcactggatcaaggccgagattcacgagttcatcctgcgc
aactggcgcattgtgaaagtcgcgaccaccaaggcccagcgcaagttgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgaggaagtccaccgtgtggcggaa
agcctcggcgtcgagccacgtgaagtgcgtgagatggaaagtcgcctgaccggccatgac
atggccttcgacccggctgctgaagccgacgacgacagtgctttccagtcgccggccaac
tacctggaagaccaccggtacgatccggcgcgtcaactggaagatgccgactggagcgac
aactccaatcacaacctgcacgaagcgctggaagtgctggacgaacgtagccgtgacatc
ctttaccagcgctggctggcggaagagaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcggatccgtcagctcgagaagagcgcgatgaacaagctcaagttg
tcgattgccgcgtaa
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