Pseudomonas sp. HS6: JJN09_21360
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Entry
JJN09_21360 CDS
T09971
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JJN09_21360 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_21360 (mutM)
Enzymes [BR:
pshs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JJN09_21360 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JJN09_21360 (mutM)
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JJN09_21360 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
UQS13756
LinkDB
All DBs
Position
complement(4730163..4730975)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSTD
PLNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKGISRARYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GNEHCKVCGTGLREVKLGQRASVFCPRCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccggaagtcgaaaccacccgtcgcgggatcgccccgcacctggaaggc
cagcgggtcagccgggtgatcgtgcgtgaccggcggttgcgctggccgattcccgaagat
ctcgatgtgcgcctgtccgggcagcgcatcgtgctggtcgagcgacgcgccaagtatctg
ctgatcaacgccgaggtcggcacgctgatcagccacttgggcatgtcgggcaacttacgg
ctggtcgaggtcgggctgccggcagccaagcatgaacatgtggacatcgaactggaatcc
ggcctggccctgcgttacaccgatccgcggcgcttcggcgcgatgctctggagcaccgac
ccgctcaatcacgaattgttgattcgcctggggccggagccgttgaccgacctgttcgat
ggcgagcggttgtttcagctgtcacgcgggcgttcgatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggtgtcggcaatatttacgcgaccgaagcgttgttcgccgcc
ggtatcgatccgcgccgcgaagccaagggcatttcccgggcgcggtatctgaagctggcg
atcgagatcaaacgcatcctcgctgccgccatcgagcgcggcggcactacgttgcgtgat
ttcatcggtggcgatgggcagccggggtatttccagcaggaactgtttgtctacgggcgt
ggtaacgagcactgcaaagtctgcggcaccggtctgcgggaagtgaagctggggcagcgt
gccagcgttttctgtccgcgctgccaaagctga
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