Pseudomonas sp. HS6: JJN09_22570
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Entry
JJN09_22570 CDS
T09971
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_22570
Enzymes [BR:
pshs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JJN09_22570
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JJN09_22570
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
UQS13984
LinkDB
All DBs
Position
complement(4984212..4985222)
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AA seq
336 aa
AA seq
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MQALPINKPLKLVAFAALAVLVASCSTSRSPSQKTSSTAVRAQPGLDINRAHKDGAPWWD
VDVSRIPDATPTLHTGPYKANPYTVLGKTYFPLQESKTYVASGTASWYGTKFHGQNTANG
EVYDLYGMSAAHKTLPLPSYVRVTNLDNNKSVILRVNDRGPFYSDRIIDLSYAAAKKLGY
AEIGTARVKVEGIDPQQWWAAKGRPAPLMLNEPQVAQNTTPVITASAGTIEQWTPPPQQH
ASDTVPVQISAKKNASAPASGQYLQVGAFANPDAAELLRSKLSGMVSAPVFISSIVRNQQ
TLHRVRLGPIGSPGEIAQVQNSVRSANLGSPSVVTE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcattgcctatcaacaaacccctgaagctggtggcattcgctgcgttggcagtg
ctggtcgccagttgctcgaccagccgttcgccgagccagaagacttcgtccactgctgtt
cgcgcgcagccgggcctggatatcaaccgggcccacaaggacggcgcgccgtggtgggac
gtcgatgtgtcgcgcatcccggacgccacgccgaccctgcacaccggcccgtacaaggcc
aacccttacaccgtgctgggcaagacctacttcccgttgcaggaatccaagacctacgtg
gcctcgggcactgcgtcctggtatggcacgaagttccacggtcagaacaccgccaatggc
gaggtctatgacctgtacggcatgagtgccgcccacaagacattaccgctgccaagttac
gttcgggtgaccaacctggacaacaacaagagcgtgatcctgcgggtcaacgaccgtggg
ccgttctactcggaccggatcatcgacctgtcctacgccgccgccaaaaagctcggttat
gccgaaatcggcaccgcgcgggtcaaggtcgagggcatcgatccgcaacaatggtgggcc
gccaagggccgtccggcgcctttgatgctcaacgagccgcaagtcgcgcagaataccacc
ccggtgatcacggcttcggccggcaccatcgagcagtggactccaccgccgcagcaacat
gcctctgacactgtacccgtacagatcagcgcaaaaaaaaacgcttctgcaccagcgtct
ggccagtatctgcaggtgggcgcgttcgccaacccggacgctgcagaactcctgaggtcg
aagctcagcgggatggtgagcgctccggtgttcatcagctcgatcgtgcgcaatcagcag
accctgcaccgggtacgcctgggaccgatcggttcgccgggtgaaattgcccaggtacag
aacagcgtgcgctcggccaatcttggttcgcctagcgtggtcaccgagtaa
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