Pseudomonas sp. HS6: JJN09_22800
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Entry
JJN09_22800 CDS
T09971
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00900
Terpenoid backbone biosynthesis
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JJN09_22800 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pshs01006
]
JJN09_22800 (ispA)
Enzymes [BR:
pshs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JJN09_22800 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JJN09_22800 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
JJN09_22800 (ispA)
Prenyltransferases [BR:
pshs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JJN09_22800 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UQS14027
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All DBs
Position
5039518..5040405
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AA seq
295 aa
AA seq
DB search
MIAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGS
KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHK
TGALIEVSVKLGALASGRAEKDELKALQSYAQAIGLAFQVQDDILDVESDTETLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAEPLRDLARYIVDRRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcgtattcggcgaccagccaggcgcgggtcaatgcggcactggaaaccctg
ttcaacgcaccgctgccagagctggcgcgactttacgaagcgatgcgctacagcgtgatg
aacggcggcaaacgcgtgcgtccgctgctagcctacgccgcgtgcgaagccctcggcagc
aaggccgagcaggccaacggcgcggcgtgtgcggtggagctgatccacgcgtattcgctg
gtacacgacgatttgccggcgatggacgatgacgatctgcgtcgcggccagccgaccacc
cacaagaaattcgacgaagcttgcgcgatccttgcaggtgacggcttgcagagcctggcc
ttcagcgccctgcttgatcctcgcctgagcgatctgagcgcggacattcgcctacaacag
gtcacggcgctggcgcacgcggcgggcccggccggcatggtcggcggccaggccatcgac
cttggctcggtcggtctgaagctcgatcagaaagccctcgaacaaatgcaccggcacaag
accggcgcgctgatcgaagtcagcgtcaagctcggcgccctggccagtggccgcgccgag
aaggacgaactcaaggccctgcaaagttatgcacaggccatcggcctggcattccaggtg
caggacgacatcctcgacgtcgaaagcgataccgaaaccctcggcaaacgccagggcgcc
gacattgcccgcgacaagccgacttacccggccctgctcggcctcgacgcagccaaggcc
tatgccctggaactgcgcgatcaggcgttgcatgcgctgcgaccgtttgacgcggctgcc
gagccattgcgcgatctggcccggtatatcgtcgaccggcgcaactga
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