Pseudomonas sp. HS6: JJN09_22810
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Entry
JJN09_22810 CDS
T09971
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_22810
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_22810
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UQS14029
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Position
5042550..5044433
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AA seq
627 aa
AA seq
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MNLSRLALPLLLLPSANTLADTFERDQALKLPDMLISANRQVEARNDSSAANTVFTREDI
ERLQPSNVTDLLQRVPGVQVAQTGGRGSLPGIYIRGTQSAQSLVLVDGQRIGNSTSGDSN
LQHLNIEQIERVEVLRGSRSVIYGSDAIGGVIQIFTRRGGEQGLQPRMHIGFGSNQTWER
SVGLSGGDEKTRFNLGASLDETAGIDRTHESYPSDSDHDAYRNKSISLSLSHALTDDIEV
GVNLLDNRGKSEFDNPFGRFDPVTFDSLQQQPYSDFTVSSFSSYIDARINERWKSRLELG
HSENREKSFDKLSDERSVFNTYRDSVTWQNDLTLDARNSLILGGDWYEDRVNSSTAFDED
SRWNRAAFIQHRFQADSFSTELGLRRDDNQQFGGQNSWSGTLTLPVNPDNDLLLSYSEGF
RAPTFNDLYYPDFSNPDLKPETSKSYELQWRSQLSDSSRLEASLYRTDLEDAIIFGSHSR
PENVASARINGFEAALKQELLGWQSNLGVAIIDPRDRDTGHTLARRARRTLSWDLDRQFD
LLGLGASWQAVSSSYDDLKNQQPLGGYALLGLRSSWALNREIKLDFKVDNLLDKGYSRAL
YSHDGSQYGYREEGRAFMFGVTWTPQL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctcgcgtctcgccctgcccctcctgctgctgccatccgccaacaccctcgcc
gacactttcgagcgcgatcaggccctgaaactgccggacatgctgatcagcgccaaccgc
caggtggaagcacgcaacgacagcagtgccgccaacaccgtgttcacccgtgaagacatc
gaacgtctgcaaccgagcaacgtcaccgacctgctgcaacgggttccgggcgtgcaagtg
gcacaaaccggcgggcgcggcagcctgcccgggatctacattcgcggcacgcagtcggcg
caaagcctggtgctggtcgatggccagcgcatcggcaactccacttccggcgacagcaac
ctgcaacacctgaacatcgagcagatcgaacgcgtcgaagtgctgcgcggttcgcgctcg
gtgatctacggcagcgatgcgattggcggggtgattcagatcttcacccggcgcggcggc
gaacaaggattgcagcctcggatgcatatcggatttggtagcaaccagacttgggagcgc
agtgtcggcctgtccggcggtgatgagaaaacccgcttcaatctcggcgccagcctcgat
gaaaccgccgggatcgaccgcactcacgagtcctatcccagtgacagcgaccacgacgcc
tatcgcaacaaatccatcagcctgagcctcagccatgcgctgaccgatgacatcgaagtc
ggcgtcaacctgctggataaccgtggcaaaagcgagttcgacaacccgttcgggcgcttc
gacccggtgactttcgactcactccagcagcagccctacagcgacttcaccgtcagcagt
ttcagcagctacatcgacgcgcggatcaacgagcgctggaagtcgcgcctggagctcggc
cacagcgaaaaccgtgagaagtccttcgacaagctcagcgacgaacgctcggtgttcaac
acctaccgtgactcggtgacctggcagaacgaccttaccctcgatgcacgcaacagcctg
atcctcggtggcgactggtacgaggaccgggtcaacagcagcaccgcgtttgacgaggac
agccgctggaaccgcgccgcgttcatccagcatcgtttccaggccgacagtttctccact
gaacttggcctgcgccgcgacgataaccagcagttcggcggtcagaacagttggagcggc
acgctgacattgccggtcaacccggacaacgatctgctgctcagctacagcgaaggcttc
cgtgcaccgaccttcaacgacctgtattacccggacttcagcaacccggatctgaaaccg
gaaacctcgaaaagctacgaactgcaatggcgcagccagttgagcgacagcagccgcctc
gaagcctcgctgtatcggaccgatctggaagacgcgatcatcttcggcagccactcacgc
ccggaaaacgtcgcttcggcgcggatcaacggctttgaggcagcgctgaaacaggaactg
ctgggctggcagagcaacctcggcgtggcgatcatcgatccccgcgaccgcgacaccggc
cacaccctggcgcgccgtgcgcgccggacgcttagctgggatctggatcgacaattcgac
cttctcggtttaggcgccagttggcaagccgtcagcagcagttatgacgacctgaaaaat
cagcaaccattgggtggttatgcgctgctcggactgcgcagcagttgggcgctgaaccgc
gaaatcaagctggatttcaaggtggataacttgctggacaagggttacagccgggcgctg
tacagccatgacggcagtcagtatggctatcgcgaggaaggtcgggcattcatgttcggc
gtgacctggacgccgcagctctga
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