Pseudomonas sp. HS6: JJN09_24505
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Entry
JJN09_24505 CDS
T09971
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02020
Two-component system
pshs02025
Biofilm formation - Pseudomonas aeruginosa
pshs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JJN09_24505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JJN09_24505
09142 Cell motility
02040 Flagellar assembly
JJN09_24505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshs03021
]
JJN09_24505
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pshs02035
]
JJN09_24505
Transcription machinery [BR:
pshs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JJN09_24505
Bacterial motility proteins [BR:
pshs02035
]
Flagellar system
Flagellar assembly proteins
Stator
JJN09_24505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Glyco_tranf_2_4
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UQS14344
LinkDB
All DBs
Position
5411969..5412709
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AA seq
246 aa
AA seq
DB search
MTASGMNFYKKSARDAQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRSIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccagcggtatgaatttctacaagaagtcggcacgtgacgcgcagtacgagctg
atcgagcgttacgcgccactggtcaaacgcatcgcctatcacttgctggcgcgattgccg
gccagtgtgcaggtcgaagacctgattcaggccggaatgatcggcctgctcgaagtctcg
accaaatacgacgccagcaagggcgccagtttcgaaacgtacgcgggcatccggatccgc
ggcgccatgctcgatgaagtacgcaagggggactgggcaccgcgctcggttcaccgcaac
acccgtatggtcagcgacgcgattcgctcgattgaagctaaaaccggccgtgacgctaaa
gatcacgaggttgcggccgaactccaattgagtctcgacgattactacgggattttgaac
gacaccctgggcagccgactgttcagtttcgacgacctgctgcaggacggcgaacacgaa
gggctgcacgaggatggcgccagtgctcatcttgagccgtcgcgcgatctggaagatgag
cgcttccaggctgcgttggcggacgcgattgccaatttgccggagcgtgagcgactggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaagtccttggcgtc
agtgaatcgcgggtcagccagttacacagccagtgcgcggcccgcttgcgggggcgtttg
ggggagtggcgagcgcgctga
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integrated database retrieval system
