KEGG   Pseudomonas sp. HS6: JJN09_24710
Entry
JJN09_24710       CDS       T09971                                 
Name
(GenBank) efflux RND transporter permease subunit
  KO
K07789  multidrug efflux pump
Organism
pshs  Pseudomonas sp. HS6
Pathway
pshs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pshs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JJN09_24710
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pshs02000]
    JJN09_24710
Transporters [BR:pshs02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   JJN09_24710
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF_C
Other DBs
NCBI-ProteinID: UQS14385
LinkDB
Position
5452410..5455532
AA seq 1040 aa
MNLSAPFIQRPIATTLLAVGLALFGVLAFNLLPVAPLPEVDFPTISVRASLPGADPSTVA
SSVATPLERQFGQIAGVTEMTSSSSLGATRITLQFDLNRDIDGAARDVQAAINAARSNLP
SDLSGNPTYRKVNPADSPILILSLTSDTATRGQMYDVASTLLEQRLLQTTGVGDVTVGGA
ALPAVRIELNPDRLNRYGVSLEQVRQVIQASNVNLPKGTVSVGDQSYGLKANDMLYQGSD
YGPLVVKQRNGDVVRISDLGDVSEDVEDLRNFGLSNGKPAVLLVVFKQPGANVIDTVDAV
KADLPFLQSSIPSAIKINILMDRTTTIRASLHDVEVTLLISIALVTLVTFGFFRDWRSTL
IPAIVVPLSLLGTFGAMYFLGYSLNNLSLMALTISTGFVVDDAIVVVENIMRHLEKGESR
VQAALAGAREVGFTVMTISVSLVAVFIPLLLMGGVVGRLFREFSISLSVAIVISMLVSLT
VTPMLASVLLRTQQQSGNGDDHPDSYFHRFYDRTLGWVVEHSFLMGLLTLLVIVLACVLY
VLVPKGFFPQEDTGRMSGSIIAAQSISFGAIQSNFSEINKKVLSNPNVATVGGFVGGGGG
IGGAVNSAQLFITLKPLADRKDSADQVIAQVRHTLGDMPGTRLYLQSAQDITVGGRQSGA
QYQYTMTADDQSTLDEWVPKVVAVLHGLPQLTDVNTDQQDNSLMASVTVNRDAAARLGVS
MSAIDQTLYDAFGQRQVSTIYRSANQYHVVMEVAPPYWDSPATLKNIYVPVGTAAVTGRG
AAAAPNLSATASQALVPLSALADYSVGRTAISISHQGTFPAVTASFNLAPGVSIGQATTL
VDNAVKQLRMPASVVGQFAGTAQVFQSSVASEPLLIVAALLSVYVVLGMLYESLVHPLTI
LSTLPSAGVGALIALLLTGTELSIIALVGVILLIGIVKKNAIMMIDFAITERREFGLSAK
DAIRRACLIRFRPIMMTTLAAILGALPLVLGSGYGSELRRPLGISIIGGLLFSQLLTLYT
TPVIYLWLDRASQRLRRRTP
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgaaccttagcgcgccgttcatccagcgccctatcgccaccacgttgctggcggtcggg
ctggcgctgttcggcgtgctggcgttcaacctgctgccggtggcgccgctgccggaggtt
gatttcccgaccatcagcgttcgtgcgtcgttgcccggtgctgacccgagcaccgtggcg
tcatcggtggcgacaccgctggaacgtcagttcgggcagatcgccggggtcactgaaatg
acctcgtccagttcgctgggggcgacccgcatcaccttgcagttcgacctcaaccgcgac
atcgacggcgcggcgcgggacgtacaagcagcgatcaacgccgcccgcagcaatctgccg
agcgacctgtccggcaacccgacctatcgcaaggtcaacccggccgactcgccgatcctg
atcctcagcctgacttcagacaccgcgacgcgcggccagatgtacgacgtggcctcgacc
ctgctcgagcagcgcctgttgcagaccacgggggtgggcgacgtgacggtgggtggcgcg
gcgttgccggcagtgcgcatcgagctcaatccggatcggctcaaccgctacggcgtcagc
ctggaacaggtgcggcaagtgattcaggcgtccaacgtcaacctgcccaaaggcacggtg
tcggtcggcgatcagtcctatggcctgaaggccaacgatatgctgtatcagggcagcgat
tacggcccgttggtggtcaagcaacgcaacggcgatgtggtgcgcatctcggacctgggc
gacgtcagcgaagacgtagaagacctgcgcaactttggtctgtccaacggcaaaccggcg
gtgttgctggtggtgttcaagcagcccggggccaacgtcatcgataccgtggacgcagtg
aaggccgacctgccgtttctgcagagttcgattccttcggcgatcaagatcaacatcctg
atggaccgcaccaccaccattcgtgcgtcgctgcacgacgtggaagtgaccctgctgatt
tcgattgcactggtgacgctggtgaccttcggcttcttccgcgactggcgcagcacgttg
atcccggccatcgttgtgccgctgtcgctgctgggcactttcggggcgatgtattttctc
ggctacagcctcaacaacctgtcgctgatggcgctgaccatttccaccgggtttgtggtg
gacgatgcgatcgtggtggtcgagaacatcatgcgtcacctggagaaaggcgagagccgc
gtgcaagcggcactggccggagcgcgggaggtgggcttcacggtgatgacgatcagcgtg
tcactggtggcggtgttcattccgttactgctgatgggcggagtggtcgggcggctgttt
cgcgagttttcgatttcgctgtcggtggccatcgtgatttcgatgctggtgtcgctgacg
gtgacgccgatgctggccagtgtgctgctgcgcactcagcagcagagcggcaacggtgac
gatcacccggactcgtattttcatcgcttttacgaccgcactctcggctgggtcgtcgag
cattcgttcctgatgggcctgctgacattgctggtgattgtgctggcgtgcgtgctgtac
gtgctggtgcccaagggcttcttcccgcaggaggacaccgggcgcatgtccggcagcatc
atcgcggcgcagagcatttccttcggggcgatccaatcgaacttcagcgagatcaataaa
aaggtcctgagcaatccgaatgtggcgactgtcggtgggtttgtcggcggcggtggcggg
atcggcggggcggtcaacagtgcgcaactgttcatcaccctcaagccgctggcagatcgc
aaggacagcgccgatcaggtcatcgcgcaggttcgccacacccttggtgacatgcccggc
acgcgcctgtatctgcagtcggcccaagacatcacggtcggcggccggcagagcggggcg
cagtaccaatacacgatgaccgccgacgaccagagcaccctcgacgaatgggtgccaaaa
gtcgtcgcggtgctgcacggcttgccgcaactgaccgatgtgaacaccgaccagcaggac
aacagcctgatggccagcgtgacggtcaatcgcgatgccgccgcccggctcggggtcagc
atgtcggccatcgaccagacgctgtacgacgccttcggtcagcgccaggtttccaccatt
taccgctccgccaatcagtatcacgtggtgatggaagtcgcgccgccgtactgggattcc
ccggcgaccctgaaaaacatctacgtgccggtgggcaccgccgctgtcaccggccgtggc
gctgcggcggctccgaacctcagcgccacggcctcgcaggcgttggtgccgctgtcggcg
ctggccgattattccgtggggcgcacggcgatttcgatcagtcatcaggggacttttccg
gcggtgacggcctcgttcaatctggcgccgggcgtctccatcggccaggcgacgacgctg
gtggacaacgccgtcaaacaattgcgcatgccggccagtgtggtcggtcagtttgccggg
acggcgcaggtgttccagtcatcggtggccagcgagccgctgttgatcgtcgcggcgctg
ctgtcggtgtacgtggtgctgggcatgctctacgagagcctggtgcatccgctgacgatc
ctttcgaccttgccgtcggccggcgtcggcgcgctgatcgccttgctgctgaccggcacc
gagctgtcgatcatcgcgctggtgggggtgattttgctgatcgggatcgtgaagaagaac
gcgatcatgatgatcgacttcgccatcaccgagcgccgcgaattcggtttgagcgccaag
gacgcgatccgtcgcgcctgcctgatccgcttccgtccgatcatgatgactacactggcg
gcgattctcggtgcgctgccgctggtgctgggcagcggttatggttcggagctgcgccgg
ccgttggggatctcgatcattggcggcttgctgttcagccagttgctgacgctgtacacc
acgccggtgatctacctttggctggaccgcgcgtcgcagcgcctccgcaggagaactcca
tga

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