Pseudomonas sp. HS6: JJN09_24710
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Entry
JJN09_24710 CDS
T09971
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JJN09_24710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_24710
Transporters [BR:
pshs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JJN09_24710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UQS14385
LinkDB
All DBs
Position
5452410..5455532
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AA seq
1040 aa
AA seq
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MNLSAPFIQRPIATTLLAVGLALFGVLAFNLLPVAPLPEVDFPTISVRASLPGADPSTVA
SSVATPLERQFGQIAGVTEMTSSSSLGATRITLQFDLNRDIDGAARDVQAAINAARSNLP
SDLSGNPTYRKVNPADSPILILSLTSDTATRGQMYDVASTLLEQRLLQTTGVGDVTVGGA
ALPAVRIELNPDRLNRYGVSLEQVRQVIQASNVNLPKGTVSVGDQSYGLKANDMLYQGSD
YGPLVVKQRNGDVVRISDLGDVSEDVEDLRNFGLSNGKPAVLLVVFKQPGANVIDTVDAV
KADLPFLQSSIPSAIKINILMDRTTTIRASLHDVEVTLLISIALVTLVTFGFFRDWRSTL
IPAIVVPLSLLGTFGAMYFLGYSLNNLSLMALTISTGFVVDDAIVVVENIMRHLEKGESR
VQAALAGAREVGFTVMTISVSLVAVFIPLLLMGGVVGRLFREFSISLSVAIVISMLVSLT
VTPMLASVLLRTQQQSGNGDDHPDSYFHRFYDRTLGWVVEHSFLMGLLTLLVIVLACVLY
VLVPKGFFPQEDTGRMSGSIIAAQSISFGAIQSNFSEINKKVLSNPNVATVGGFVGGGGG
IGGAVNSAQLFITLKPLADRKDSADQVIAQVRHTLGDMPGTRLYLQSAQDITVGGRQSGA
QYQYTMTADDQSTLDEWVPKVVAVLHGLPQLTDVNTDQQDNSLMASVTVNRDAAARLGVS
MSAIDQTLYDAFGQRQVSTIYRSANQYHVVMEVAPPYWDSPATLKNIYVPVGTAAVTGRG
AAAAPNLSATASQALVPLSALADYSVGRTAISISHQGTFPAVTASFNLAPGVSIGQATTL
VDNAVKQLRMPASVVGQFAGTAQVFQSSVASEPLLIVAALLSVYVVLGMLYESLVHPLTI
LSTLPSAGVGALIALLLTGTELSIIALVGVILLIGIVKKNAIMMIDFAITERREFGLSAK
DAIRRACLIRFRPIMMTTLAAILGALPLVLGSGYGSELRRPLGISIIGGLLFSQLLTLYT
TPVIYLWLDRASQRLRRRTP
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagcgcgccgttcatccagcgccctatcgccaccacgttgctggcggtcggg
ctggcgctgttcggcgtgctggcgttcaacctgctgccggtggcgccgctgccggaggtt
gatttcccgaccatcagcgttcgtgcgtcgttgcccggtgctgacccgagcaccgtggcg
tcatcggtggcgacaccgctggaacgtcagttcgggcagatcgccggggtcactgaaatg
acctcgtccagttcgctgggggcgacccgcatcaccttgcagttcgacctcaaccgcgac
atcgacggcgcggcgcgggacgtacaagcagcgatcaacgccgcccgcagcaatctgccg
agcgacctgtccggcaacccgacctatcgcaaggtcaacccggccgactcgccgatcctg
atcctcagcctgacttcagacaccgcgacgcgcggccagatgtacgacgtggcctcgacc
ctgctcgagcagcgcctgttgcagaccacgggggtgggcgacgtgacggtgggtggcgcg
gcgttgccggcagtgcgcatcgagctcaatccggatcggctcaaccgctacggcgtcagc
ctggaacaggtgcggcaagtgattcaggcgtccaacgtcaacctgcccaaaggcacggtg
tcggtcggcgatcagtcctatggcctgaaggccaacgatatgctgtatcagggcagcgat
tacggcccgttggtggtcaagcaacgcaacggcgatgtggtgcgcatctcggacctgggc
gacgtcagcgaagacgtagaagacctgcgcaactttggtctgtccaacggcaaaccggcg
gtgttgctggtggtgttcaagcagcccggggccaacgtcatcgataccgtggacgcagtg
aaggccgacctgccgtttctgcagagttcgattccttcggcgatcaagatcaacatcctg
atggaccgcaccaccaccattcgtgcgtcgctgcacgacgtggaagtgaccctgctgatt
tcgattgcactggtgacgctggtgaccttcggcttcttccgcgactggcgcagcacgttg
atcccggccatcgttgtgccgctgtcgctgctgggcactttcggggcgatgtattttctc
ggctacagcctcaacaacctgtcgctgatggcgctgaccatttccaccgggtttgtggtg
gacgatgcgatcgtggtggtcgagaacatcatgcgtcacctggagaaaggcgagagccgc
gtgcaagcggcactggccggagcgcgggaggtgggcttcacggtgatgacgatcagcgtg
tcactggtggcggtgttcattccgttactgctgatgggcggagtggtcgggcggctgttt
cgcgagttttcgatttcgctgtcggtggccatcgtgatttcgatgctggtgtcgctgacg
gtgacgccgatgctggccagtgtgctgctgcgcactcagcagcagagcggcaacggtgac
gatcacccggactcgtattttcatcgcttttacgaccgcactctcggctgggtcgtcgag
cattcgttcctgatgggcctgctgacattgctggtgattgtgctggcgtgcgtgctgtac
gtgctggtgcccaagggcttcttcccgcaggaggacaccgggcgcatgtccggcagcatc
atcgcggcgcagagcatttccttcggggcgatccaatcgaacttcagcgagatcaataaa
aaggtcctgagcaatccgaatgtggcgactgtcggtgggtttgtcggcggcggtggcggg
atcggcggggcggtcaacagtgcgcaactgttcatcaccctcaagccgctggcagatcgc
aaggacagcgccgatcaggtcatcgcgcaggttcgccacacccttggtgacatgcccggc
acgcgcctgtatctgcagtcggcccaagacatcacggtcggcggccggcagagcggggcg
cagtaccaatacacgatgaccgccgacgaccagagcaccctcgacgaatgggtgccaaaa
gtcgtcgcggtgctgcacggcttgccgcaactgaccgatgtgaacaccgaccagcaggac
aacagcctgatggccagcgtgacggtcaatcgcgatgccgccgcccggctcggggtcagc
atgtcggccatcgaccagacgctgtacgacgccttcggtcagcgccaggtttccaccatt
taccgctccgccaatcagtatcacgtggtgatggaagtcgcgccgccgtactgggattcc
ccggcgaccctgaaaaacatctacgtgccggtgggcaccgccgctgtcaccggccgtggc
gctgcggcggctccgaacctcagcgccacggcctcgcaggcgttggtgccgctgtcggcg
ctggccgattattccgtggggcgcacggcgatttcgatcagtcatcaggggacttttccg
gcggtgacggcctcgttcaatctggcgccgggcgtctccatcggccaggcgacgacgctg
gtggacaacgccgtcaaacaattgcgcatgccggccagtgtggtcggtcagtttgccggg
acggcgcaggtgttccagtcatcggtggccagcgagccgctgttgatcgtcgcggcgctg
ctgtcggtgtacgtggtgctgggcatgctctacgagagcctggtgcatccgctgacgatc
ctttcgaccttgccgtcggccggcgtcggcgcgctgatcgccttgctgctgaccggcacc
gagctgtcgatcatcgcgctggtgggggtgattttgctgatcgggatcgtgaagaagaac
gcgatcatgatgatcgacttcgccatcaccgagcgccgcgaattcggtttgagcgccaag
gacgcgatccgtcgcgcctgcctgatccgcttccgtccgatcatgatgactacactggcg
gcgattctcggtgcgctgccgctggtgctgggcagcggttatggttcggagctgcgccgg
ccgttggggatctcgatcattggcggcttgctgttcagccagttgctgacgctgtacacc
acgccggtgatctacctttggctggaccgcgcgtcgcagcgcctccgcaggagaactcca
tga
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