Pseudomonas sp. HS6: JJN09_24775
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Entry
JJN09_24775 CDS
T09971
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00020
Citrate cycle (TCA cycle)
pshs00190
Oxidative phosphorylation
pshs00650
Butanoate metabolism
pshs00720
Other carbon fixation pathways
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
pshs01120
Microbial metabolism in diverse environments
pshs01200
Carbon metabolism
Module
pshs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pshs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pshs_M00149
Succinate dehydrogenase, prokaryotes
pshs_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JJN09_24775
00650 Butanoate metabolism
JJN09_24775
09102 Energy metabolism
00190 Oxidative phosphorylation
JJN09_24775
00720 Other carbon fixation pathways
JJN09_24775
Enzymes [BR:
pshs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JJN09_24775
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
UQS14398
LinkDB
All DBs
Position
5469179..5470951
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQEGEF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATEADIEAALSRLNALNNRTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLADLRTRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcattattggtggtggcggtgccggc
atgcgcgctgcgctgcagctggcacagggcggtcacaagactgccgtgatcaccaaggtc
ttcccgacccgttcgcacactgtatccgcccagggcggcatcacctgcgccatcgcgtcc
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgccgttttcgag
ctggaccacatgggtctgccgttctcgcgtaccgagcaaggccgtatctaccagcgtccg
ttcggcggtcagtcgaaggattacggtaagggcgggcaggctgcccgtacttgcgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctttatcagggcaacctgaaagccggt
accacgttcctgaacgagtactacgctgtcgacctggtgaaaaaccaggaaggcgaattc
gtcggtgtgatcgcaatctgcatcgaaaccggcgaaaccacctacatccgcgcgaaagcc
accgtattggctaccggcggtgcaggtcgtatctatgcatccaccaccaacgccctgatc
aacaccggtgacggcgtcggcatggctctgcgtgctggcgtgccggtacaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggttaccgaaggctgc
cgtggtgaaggtggttacctcatcaacaagcacggcgagcgtttcatggagcgttacgct
ccgaacgccaaagacctggctggtcgtgacgttgttgcccgttcgatggttaaagaaatc
atcgccggcaacggttgcggtccgaatggcgaccacgtaatgctcaaactcgaccatctg
ggcgaggaagtgctgcacagccgtctgccaggcatctgcgaactgtcgaagactttcgcg
cacgttgacccggtggttgccccggttccggttgttccgacttgccactatatgatgggc
ggcgttgccaccaacattcatggccaggcgatcacccagaatgccgaaggcgtggatcag
atcatccctggtctgttcgcggtcggtgaagtggcttgcgtatcggttcacggtgccaac
cgtctgggcggcaactcgctgctcgacctggtggtattcggtcgcgctgccggcctgcac
ctcgaaaaagcgctgactgacggcatcgaatacgatgacgccaccgaagccgacatcgaa
gctgccctgtcgcgcctgaacgcactgaacaaccgtaccgacggcgaagacgtcgctacc
ctgcgtcgcgagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaaaggcatcgcgcaactggctgacctgcgtacccgcatcgccaacgtgaag
atcaacgataagtcgcaggctttcaacactgcacgtatcgaagcgctggaactgcaaaac
ctgctggaagtggctgaagctaccgccatcgctgccgaagtacgtaaagagtcccgcggt
gctcacgcccgtgaagacttcgaagatcgtgacgacgaaaactggctgtgccacaccctg
tacttcccgggtgacaagcgcgtcaccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaaccaaaagtccggacttattaa
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