Pseudomonas sp. HS6: JJN09_25640
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Entry
JJN09_25640 CDS
T09971
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JJN09_25640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UQS14556
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Position
5646184..5648508
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILSSIQEQGKLTPELEREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLAPETEAARFIDAEKGVADVKAALEGAKYILMERFAEDANLLEKLRT
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQVGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDSTGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHSVDLIAIGNGTASRETDKLAIELIKKYPAMKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAGFLKRLDP
KKYTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
AFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQGSAPRKESTPAAPANNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggcgtacgcccacaacaggtcgaa
gcggccgtcgcgctactcgatgaaggctctaccgttcccttcatcgcccgttaccggaaa
gaagtgaccggcagcctcgatgacactcagttgcgtcatctggaagagcgtttgcgctac
ctgcgagaactcgacgaacggcgcatcagcattctttccagcatccaggagcagggcaaa
ctcacccctgaactggagcgcgaaatcaaactcgccgacaccaagacccgcctcgaagac
ttgtatctgccgtacaaacagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggtctgttcaacgacccgagcctggctccggaaaccgaagcc
gcacgcttcatcgacgccgaaaaaggcgtggccgacgtcaaggctgcactggaaggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccaacctgctggaaaaactgcgtact
tatctgaaacaggaagccaccctcagtgcccgcgtgatcgccggtaaagaagaggaaggc
gccaagttccgcgattacttcgaacacgacgaaccgctgaaaagcatgccgtcgcaccgc
gcgctggcgattttccgtggccgcaacgaaggcattctcagttccgcgctgaaagtcggc
gacgaattgccgggcaccatgcatccgtgtgaaggcatgatcggccaacaagtcggcatc
cagaatcagaaccgccccgccgacaaatggctgggcgaagtggtgcgctggacatggaag
gtcaagctctacacccacctggaaaccgacctgctcggcgagttgcgcgacggcgcggaa
accgaagcgatcaacgtgttcgcccacaacctgcacgacttgctgctggccgctccggcc
ggcccgcgcgctaccctgggcctcgacccgggcctgcgcaccggctgcaaggtcgccgtg
gtcgactccaccggcaagctgctggatcacgccacggtttacccgcacgtgccgcacaac
aagtgggatcagaccatcgccatcctggccgccctgtgcgccaagcactcggtcgatctg
atcgccatcggcaacggcaccgccagccgtgagaccgacaaactggccatcgagctgatc
aaaaaatacccagcgatgaaaatgaccaaggtcatggtctccgaagccggcgcatcggtg
tactcggcatcggaactggcagccaaggaattcccggatctggacgtatcgatccgtggt
gccgtgtccatcgcccgtcgcttgcaggatccactggccgaactggtgaagatcgatccg
aaatccatcggtgtcggtcagtaccagcacgacgtgtcgcagctgaaactggcacgcggc
ctggacgccgtggtcgaggactgcgtgaacgccgtgggcgtggacgtgaacactgcgtcc
gtggcgctgctggcgcggatctctggcctcaacgcgaccctggcgcagaacatcgtgact
caccgtgacgagcacggcgcgttcaagacccgcgctgcgctgaagaaagtcgcgcgtctg
ggcgagaaaaccttcgaacaggccgccggcttcctgcgtgtgatgaacggcgacaacccg
ctggattcctcggccgttcacccggaagcctatccgctggtgcaacgcattgccgctgaa
accgaccgcgacatccgctcgctgatcggcgacgcggggttcctcaagcgtctggatccg
aagaaatacaccgacgagactttcggtctgccaaccgtcaccgacatcctgcaggaactg
gaaaaaccgggccgcgacccgcgtccggagttcaagaccgccgagttccaggaaggcgtc
gaggacttgaaggacctgcaactggggatgatcctcgagggcgtggtgaccaacgtgacc
gcgttcggcgcgttcgtcgacatcggtgtgcatcaggacggtctggtgcacatctcggcg
ctgtcggagaagttcatcaaggatccgcgcgaagcggtgaaggccggtgacgtggtgaaa
gtgaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacaccccgggcgagaaaatcgacggtgcccgtggcgcgcgtccgggctcggcgccacgc
cagtcgcagggttcggctccacgcaaggaaagcaccccggcggctccggcgaacaacgcc
atggcgtcgctgttcgccaacgccaagcagttgaagaaacgctga
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