Pseudomonas sp. HS6: JJN09_26070
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Entry
JJN09_26070 CDS
T09971
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJN09_26070 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_26070 (choX)
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
JJN09_26070 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UQS14639
LinkDB
All DBs
Position
complement(5743492..5744409)
Genome browser
AA seq
305 aa
AA seq
DB search
MVKLSTVVTVSLLALGSASAFAESCDTVKMADPGWSDIAATNAITGFLLDGMGYKAKVDT
LAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLDGTEFTLAVPDYVW
DAGVHNFADLNKFADKFEKKIYGIGSGAPANISLQEIIKKNDFDLGQWKLIESSEQAMLA
EVSRAVKKQKFVTFLGWTPHPMNVQLKMHYLKGGEKYFGDTGSVYTLTRKGYAQACPNVG
KLLTNLSFTQEMENSIMAEVVNKKVSNADAVKAWIKANPGVLDKWLDGVKTVDGKDALAA
VKAKL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagttatccacagtcgtgacggtcagtctgttggcactgggcagcgcatccgcg
ttcgccgagagctgcgacacggtgaaaatggccgatcccggctggagcgacatcgccgcg
accaacgccatcaccgggtttctgctggatggcatgggctacaaggccaaggtcgacacc
ctcgcggtgccgatcaccttcggcggcctgaaggatggccaggttgacgtgttcctcggc
aactggatgccggcgcagcagggcttctacgacaagttcgtggccaccggtgatgtcacc
caactggcgaagaaccttgatggcaccgagttcaccctggccgtgccggattacgtgtgg
gatgcgggtgtgcataactttgccgacctgaacaaattcgccgacaagttcgagaagaag
atctacggcatcggctccggcgcgccggcgaacatctcgctgcaagagatcatcaagaag
aacgacttcgacctgggacagtggaagctgatcgagtccagcgaacaggcgatgcttgcc
gaagtctcgcgagcggtgaagaaacagaaattcgtcaccttcctcggctggaccccgcac
ccgatgaacgtgcagctgaaaatgcactacctcaagggtggcgagaagtacttcggcgac
acgggcagcgtctacaccctgacccgcaagggctacgcccaggcctgtccgaatgtgggt
aaattgctgaccaatctttcgttcactcaggagatggagaacagcatcatggccgaggtg
gtgaacaagaaagtcagcaatgcggatgctgtgaaggcttggatcaaggcgaatccgggg
gttttggataagtggcttgatggggtgaagacggtggatgggaaggatgcgttggcggca
gtcaaagccaagctctga
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