Pseudomonas sp. HS6: JJN09_26555
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Entry
JJN09_26555 CDS
T09971
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_26555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_26555
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JJN09_26555
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
DUF2158
RsgA_GTPase
MIT_C
AAA_22
Rad17
Motif
Other DBs
NCBI-ProteinID:
UQS14734
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All DBs
Position
complement(5840988..5842142)
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AA seq
384 aa
AA seq
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MSAVIKDASQQNDKPLVSLRNLNKHYGDFAAVDNISLDIKDGEFLTFLGSSGSGKSTTLS
MLAGFETPSSGEILVNGQSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIVFPLAIRKLAA
AERDKRVDAMLKLVQLEQFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKK
LREDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGSGYDLYQNPPN
AFVASFLGNSNFLKLKAQGNGAASFEGQSLSIRLTAGLQTGQDVLLMVRPEKALALSVLQ
AASESLAAGWNEVSAKVVEVLFLGESQTCSVVTSGGTSMTVKALSAAGMPLKAGDAVRVR
WATADACVYTEWAESDLNKAAGAH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtgatcaaagacgcatcccagcagaacgacaagcccctggtcagcctgcgc
aacctgaacaagcactacggcgatttcgctgccgtggacaacatctcgctggacatcaag
gacggcgaattcctgaccttcctcggttccagcggctcgggcaaaagcaccacgctgtcg
atgctcgcgggcttcgaaaccccgagcagcggcgagatcctggtcaacggccagtcgctg
gtcaacgtgccgccgcacaagcgcgacatcggcatggtgttccagcgttattcgctgttc
ccgcacctgtcggtgcgcgacaacatcgtgttcccgctggcgattcgcaaactcgctgcg
gccgaacgcgacaagcgcgtcgatgcgatgttgaaactggtgcagctcgagcaattcgcc
catcgccgcccttcgcaactgtccggcggccagcagcaacgggtcgctattgcccgggcg
ctggtttacgaaccacgcattctgttgatggatgaaccgctcggtgcgctggacaagaag
cttcgcgaagacttgcaggatgaattgcgccagttgcaccgccgcctcggcatcaccatc
gtctacgtgacccacgaccaggaagaagccatgcgcctgtcccagcgcatcgcgattttc
agtcacggcaagattgtcgggctcggcagcggttatgacctttatcagaatccgccgaat
gcgtttgtggcgtcgtttctcggcaactcgaacttcctcaagctcaaggctcaaggcaac
ggcgcggcgagttttgaagggcagtcgctgtcgatccgtctcaccgctggattgcagact
ggtcaggatgtgctgctgatggtgcgcccggaaaaagcgctggcgttgagcgtgctgcaa
gcggccagcgagagtttggcggcgggttggaatgaggtttcggcgaaggtggttgaggtg
ctgtttctgggggagagccagacttgcagtgtggtgacttcgggcgggacttcgatgacg
gttaaggcgttgtcggcggcggggatgccgttgaaggctggggatgcggtgcgggtgcgt
tgggcgactgctgatgcttgcgtttacaccgagtgggccgagagtgatttgaacaaagcg
gcgggggctcattga
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