Pseudomonas sp. HS6: JJN09_26590
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Entry
JJN09_26590 CDS
T09971
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_26590
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JJN09_26590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
HTH_27
HTH_11
DUF6880
HTH_36
HTH_5
GMT-wHTH
HTH_41
Ribosomal_S25
MarR
HTH_29
FliX
HTH_28
HTH_23
PLU-1
HTH_20
TFIIE_alpha
HTH_54
Motif
Other DBs
NCBI-ProteinID:
UQS14740
LinkDB
All DBs
Position
complement(5847266..5848018)
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLADAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALDENRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNQEMEKMVEAIKSGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGATPPITLP
IALKEPRIGH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacagcttcaaggtcaatcgcaaccccgtcaccctgcgc
gaaatcgtgctggataaactgcgaagcgccatcatgaacttccagctgctgccgggcgat
cgcctggtggaacgcgatctgtgcgatcgcctgggtgtgagccgtacgtcggtgcgtgaa
gccttgcgtcacctggaatccgaaggcctggtggaattcgccgacgccaagggcccgcgc
gtggcgatcatcaccctcgccgatgcggtcgacatctatgaactgcgctgcgtgctcgaa
ggcctgatcgtccagctgttcaccctgcgcgccaaggccaaggacatcaaggccctggaa
aaagccctcgacgagaaccgcaaggcgctcaaggacggcgagctgcaacaggtgatcgac
tcggtgcagggtttctacgacgtgctgctggaaggctcgggcaaccatgtcgcggccacg
cagctgcgtcagttgcaggcgcgcatcagctatttgcgggcgacgtcggtgtcccaggaa
aaccgtcgcggtgcgagcaaccaggaaatggaaaaaatggtcgaggcgatcaagagcggc
gatccgctggcggcgcatcaggcgtgcgtcgatcacgtgcgcgccgccgctgccgtggcc
ctcgattatctgaagcgcaaacaggaagaaaccggcgccacaccgccgatcactctgccc
atcgcgctgaaagaaccacgcataggtcactga
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