Pseudomonas sp. HS6: JJN09_26695
Help
Entry
JJN09_26695 CDS
T09971
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_26695
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JJN09_26695
Archaeal homologous recombinant proteins
JJN09_26695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UQS14761
LinkDB
All DBs
Position
complement(5870958..5872202)
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLKLAQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPNASGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLIEAANAKRQPG
QALVAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGASISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVVLDGETLISVEPMLIPRSVNLQRLGPAPLTEILLQL
ADLPNIDLLAETQRQPWLEVRVRLDEPQPDLRHQVESALQGKAVRLVRIAAEYAGNRGAD
GAEDGSALIELDQLTPQELFSRAWLDNYGNEVDEQTLKDFAELLQDVQMEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcaccttgggcaaaaccttcacggccaggagcgc
gatttcgagcacgcctgttttctcgagtggctgctgcgccaattgaagctggcgcagccg
gatgtgctgctgatcgccggcgacatcttcgacacggtcaatccgccggtcaaagcccag
gaacgcctctacgatttcatcgtcagcgcccacgaacagcaaccgttgctgaccatcgtg
atgatcgccggcaaccacgattccggctcgcggatcgaactgcccgcaccgttgatgcga
cgtttgcgcacccatgcgctgggccgggtgttgtggctggacgacgggcaactggatgcg
gagcgtctgttgttgccgctgccgaatgcctcgggcgaaatcgccgcgtggtgcctcgcg
ttaccgttcctgcggcctgccgaagtaactggcgcacatctgggcgacaactatctgcgc
ggcattggccaagtacatgaatggctgatcgaagcggccaacgccaagcgtcagccgggc
caggcactggtcgccatcagccatgcgcacatggccggcgggtcggtgtcggaagactcc
gaacgcagcctgatcatcggcaacgccgaagccctgccggccagtctgttcggggcgagc
atcagctatgttgcgctcggccatttgcacaagccgcagaaggtcaacggtgaagagcgg
attcgctacagcggctcgccgatcccgttgtcgttctcggaaatcggctatcaacaccag
attctcgatgtcgtgctcgacggcgaaacactgatcagcgtcgagccaatgctgatcccc
cgctccgtcaatctgcaacgtctcggccctgcgccgctcacagaaatcctgttgcaactg
gccgacctgccgaacatcgacctgctggccgaaacccagcgccagccatggctggaagtg
cgggtgcgcctcgacgagccgcagccagacttgcgccatcaagtcgaaagcgccctgcaa
ggcaaagccgtgcgtctggtgcggatcgcggccgaatacgccggtaaccgtggtgctgat
ggcgccgaggacggcagcgcgctgatcgaactggaccagctaacaccacaggaattgttc
agccgcgcctggctcgacaattacggcaacgaggtcgacgagcaaaccctcaaggacttc
gccgaactgctgcaagacgtacagatggagggcgagcagccatga
DBGET
integrated database retrieval system
