Pseudomonas sp. HS6: JJN09_27125
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Entry
JJN09_27125 CDS
T09971
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshs03036
]
JJN09_27125 (smc)
Chromosome and associated proteins [BR:
pshs03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JJN09_27125 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UQS14843
LinkDB
All DBs
Position
complement(5991810..5995298)
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AA seq
1162 aa
AA seq
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MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTSRKPVSQASIELVFDNSDGTLLGEWAAYAEISIRRKVTRDSQTTYYLNGA
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLREELERQLERLHRQAEAAKKYQEFKAEERQLKAQLSALRWQDL
NDQVGQRESIIGNQEISFEALVAEQRNADAAIERLRDGHHDLSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGHDRTLLLTLGEELDQLTPEQEITN
AAAEEAAAALEDSETVMHGWQEQWDTFNLTAAEPRRQAEVQQSRIQQLETSMERLADRQK
RLGEERALLSADPEDAAIMELSEQLAESEATLEDLQTSEEAQVEKLEQLRQELQQALTAQ
QQAQGDLQRLNGRLASLEALQQAALDPGTGTAEWLKEHNLAERPRLAEGLKVEAGWELAV
ETVLGADLQAVLVDDFDGFDLSGFAQGDLRLLSPGNDGVRVAGSLLDKVEAQVDLSPWLA
QVKPVDSLEQALALRGQLAAGQSLISRDGYWVGRHFLRVRRASEAESGMLARGQEIESLH
AEREEREATVEAMETRLQTLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKAE
QLTLRRTRLDEELVELAEQRALEHENIGEARIQLQDALDAMALDTEQRELLLAQRDSLRE
RLDRVRQEARQHKDHAHQLAVRLGSLRAQHDSTRQALERLEMQAERLTEKREQLSLNLEE
GEAPLEELRLKLEELLDKRMSVDDELKTAQIALEDADRELRDAEKRRTQAEQQSQLIRGQ
LEQQRMEWQALTVRRKALQDQLLEDGYDLHGVLNTLTAEASEKAAEEELERIAARIQRLG
AINLAAIDEYTQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGRAYLELTGEDLLDTGVTIMAQPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQTVQFIYITHNKIAMEMAEQLMGVTM
HEPGCSRLVAVDVEEAMAMVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttgcggctcaagtgcatcaaactggcggggttcaaatccttcgtcgacccgaccacggtg
aacttccccagcaacatggcggcggtcgtcgggccgaacggttgcggcaagtcgaacatc
atcgacgccgtgcgctgggtgatgggcgaaagctcggcgaaaaacctgcgcggcgagtcg
atgaccgacgtcatcttcaacggctcgaccagccgcaaaccggtgagccaggcgagcatc
gaactggtgttcgacaactccgacggcacgctgctgggcgagtgggcggcgtacgcggaa
atttcgatccgccgcaaagtgacccgcgacagccagacgacttattacctcaacggcgcc
aaatgccgtcgtcgcgacatcaccgacatcttcctcggcaccggcctcgggccgcgcagc
tactcgatcatcgagcaggggatgatctccaagctgatcgagtccaagccggaagacctg
cgcaacttcatcgaagaagccgcaggcatctccaagtacaaggagcgccggcgcgagacg
gaaaaccgtatccgccgcacccacgaaaaccttgcccgtctgaccgacctgcgcgaagaa
ctcgagcgtcagctcgaacgcttgcaccgccaggccgaggccgccaagaagtatcaggaa
ttcaaggctgaagagcgccagctcaaggcgcaactgtcggccctgcgctggcaggatctg
aacgatcaggtcggccagcgcgagtcgatcatcggtaatcaggaaatcagcttcgaagcg
ctggtcgccgaacaacgcaacgccgacgccgccattgaacgcctgcgggacgggcaccat
gacctgtccgagcgcttcaatctggtgcaggggcgcttctattcggtcggcggtgacatc
gcccgggtcgagcagagcatccagcacggccagcagcgcttgcgccaattgcaggacgat
ctgaaagaagccgagcgcgcgcgcctcgaaaccgaatcgcacctgggccacgaccgcacc
ttgttgctgaccctcggcgaagagctcgatcaactgacccccgagcaggaaatcaccaac
gccgccgccgaagaagccgccgctgcgctggaagattccgaaaccgtcatgcacggctgg
caggagcagtgggacaccttcaacctgaccgccgccgaaccgcgtcgtcaggccgaagtg
cagcagtcgcgcatccagcagctggaaaccagcatggagcgtctggccgatcggcaaaag
cgtctgggcgaagagcgggcgctgctctcggccgatccggaagacgcggcgatcatggaa
ctcagcgaacagctcgccgagtccgaagccacccttgaagatttgcagaccagcgaagaa
gctcaagtcgaaaaactcgagcaactgcgccaggaattgcagcaggcgctcaccgcgcaa
cagcaggcgcagggcgatttgcagcgcctcaatggtcgcctcgcctccctcgaagccttg
cagcaggccgcgctcgatccgggcaccggcaccgccgaatggctgaaagaacacaacctc
gccgagcgtccgcgtctggccgaaggcctgaaggtcgaggccggttgggaactggcggtg
gaaaccgtgctgggtgccgacctgcaagcggtgcttgtggacgatttcgacggcttcgat
ctgtccggttttgcccaaggcgatctgcgtttgctcagccccggcaacgacggcgtgcgt
gtggccggcagcctgctggacaaggtcgaggcgcaggtggatttgtcgccctggctcgct
caggtcaaaccggtcgacagccttgaacaggcgctggccctgcgcggccaactggctgcc
gggcagagcctgatcagccgcgacggttactgggttggccggcatttcctgcgggtacgt
cgcgccagcgaagccgaaagcggcatgctcgcacgcgggcaggaaatcgagtcgctgcat
gcggaacgcgaagagcgtgaagccacggtcgaggccatggagacccgtttgcaaaccctg
cgcgcgcaacagcgtcagcaggaaaacggccgcgaacatctgcgtcgtttgctgcaggac
gaagcccgtcagcagggcgaattgaaagctcaactgtccgccggcaaagccaaggccgaa
caattgacgctgcgccgcacccgtctcgatgaagagctggtcgagctcgccgaacagcgc
gcgctggagcacgaaaacatcggcgaggcgcggatccagttgcaggacgccctcgacgcc
atggccctcgacaccgaacagcgcgagttgctactggcccagcgtgacagcctgcgcgag
cgcctcgaccgcgtgcgtcaggaagcccgccagcacaaggatcacgcccatcaattggcc
gtacgcctgggttcgctacgagcgcaacatgattcgacacgtcaggctctggaacgcttg
gagatgcaggccgagcgtctcactgaaaaacgtgaacagctcagcctgaacctggaggag
ggcgaagcgccgctggaagaactgcgcctcaagctcgaagagttgctcgacaagcgcatg
agcgtcgacgacgaactcaagaccgcgcagatcgccctcgaagacgccgatcgcgaattg
cgcgacgcggaaaaacgccgtacccaagccgagcagcaatcgcaattgatccgtggccag
ctcgaacagcaacgcatggaatggcaggccctgaccgtgcgccgcaaggccctgcaggat
caactgctggaagacggctacgatttgcacggcgtgctcaacaccctgaccgccgaggcc
agcgagaaggccgccgaagaagaacttgaacgcatcgccgcgcgcattcagcgcctgggc
gcgatcaacctcgcggcgatcgacgaatacacgcaacaatccgagcgtaaacgttatctg
gatgcccaggacgccgatctggtcgaagcactggagaccctggaaaacgttatccgcaag
atcgacaaggaaacccgtaaccgtttcaaagatacctttgatcagatcaatggcggttta
caggcgcttttcccgaaagttttcggtggcgggcgcgcgtatttggaactgacgggcgaa
gatctactcgatacaggggtgacgatcatggcgcagccgcccggaaagaagaacagcacc
atccatttgctctccggcggcgaaaaagccctgaccgcattggcactggtttttgcgatc
ttcaagttgaacccggcgccgttctgcatgctcgatgaggttgacgcgccactggatgac
gctaacgttggacgctacgcacgattggtcaaagagatgtcgcagaccgtgcagttcatc
tatatcacccacaacaagatcgccatggaaatggccgagcagttgatgggtgtgacgatg
cacgagccgggttgttcgcgactggtagccgtggatgtcgaggaggcgatggcgatggtg
gatgcctga
DBGET
integrated database retrieval system
