Pseudomonas sp. HS6: JJN09_27235
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Entry
JJN09_27235 CDS
T09971
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_27235
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_27235
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
OmpW
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
UQS14865
LinkDB
All DBs
Position
complement(6025877..6026926)
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AA seq
349 aa
AA seq
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MKLKNTLGLAIGSLIAATSFGALAQGQGAVEGELFYKKQYNDSVNHVEDGFNPGASIGYF
LTDDVSLNLTYDKNNHTRSNDGTGSQKLHGDNFGLNAQYHFNNAGDALRPYVSGGVKHGS
LTNVADDGHTGRDQSTYLTAGAGVKYYFLENFYARAGVDADYKLDNGRWNYAPVIGLGVN
FGGGNKPAAAPVPAPAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELD
VKFDFDKSVVKPNSYGDIKNLADFMKQYPSTRTTVEGHTDNVGPDAYNQKLSERRANAVK
QVLVNQYGVESSRVGSVGYGESRPVADNKTEAGRAVNRRVEAQVEAQAK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcttggccattggttctttgattgccgctacttcgttc
ggcgcactggcacaaggccaaggcgcagttgaaggcgaactgttctacaagaagcagtac
aacgacagcgttaaccatgtcgaagacggcttcaacccaggcgcctctatcggttacttc
ttgaccgacgacgtatcgttgaacttgacctacgacaagaacaaccacacccgttcgaac
gacggcaccggcagccagaaactgcacggcgacaacttcggtctgaacgctcagtaccac
ttcaacaacgctggcgacgctctgcgtccttacgtttctggtggcgtgaagcacggcagc
ctgaccaacgtagctgatgacggtcacaccggtcgcgatcagtcgacctacctgactgct
ggcgctggcgttaagtactacttccttgaaaacttctacgcccgtgctggtgtagacgct
gactacaaactggacaacggtcgctggaactacgctccagtaatcggtctgggtgtgaac
ttcggtggcggcaacaagcctgctgctgctccagttccagcaccagctgaagtctgctcc
gacagcgacaacgatggcgtttgcgacaacgttgacaagtgcccagacaccccagccaac
gtaactgttgacgctgatggctgcccggcagttgctgaagttgttcgtgttgagctggac
gtgaaattcgacttcgacaagtcggtcgtcaagccaaacagctacggcgatatcaaaaac
ctggctgacttcatgaagcagtacccatcgactcgcaccactgttgaaggtcacactgac
aacgtcggtcctgacgcttacaaccagaaactgtccgagcgtcgtgcaaacgccgttaaa
caagttctggttaaccagtacggtgttgaatcgtcccgcgttggttcggttggctacggc
gaatcccgcccagttgctgacaacaaaaccgaagctggtcgtgctgttaaccgtcgcgta
gaagcgcaggttgaagctcaagctaagtaa
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