Pseudomonas sp. HS6: JJN09_27570
Help
Entry
JJN09_27570 CDS
T09971
Symbol
pgaB
Name
(GenBank) poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
pshs
Pseudomonas sp. HS6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
Motif
Other DBs
NCBI-ProteinID:
UQS14927
LinkDB
All DBs
Position
6110984..6112981
Genome browser
AA seq
665 aa
AA seq
DB search
MPFISRFILLLGVLLVSACAQQAPAFAPPSERPVAANEKPWPKNHVLGIAYHDIEDRDPD
QAVVAVRTERMIEQLAWLRENNYKPVTVDQIMAARKGGPELPPKAILLSFDDGYASFYTR
VMPVLRAYNWHALLAPVGVWIDTPLNQPVDFAGAMRPRSDFLTWDQVREISQSGLVEIAA
HTDASHKGILANPQGNMQPAAATRRYDPVTKRYESEADFQARIRTDVATISEKIRKATGK
KPRIWVWPYGTADGTSLTVVSEQGYEMALTLDDGLDALDNLMSSPRFLVASDPDGEHFAN
SIVAVQSDFAMRVVHVDLDNVYDPDPAQQEVNLGKLIQRMADMGANTVFLQAFADPKGDG
LVHSLYFPNRHLPMRADIFDRVAWQLRTRAHVKVFAWMPVLSFALDSKLPRVTRWDPKTG
TTSVDPDQYKRLSPFDPEVRRIIGEIYEDVARLTSVDGILYHDDAVLSDFEDASPEALKA
YAAHGLPGSIAALRDDPAAMQRWTRFKSRYLIDFTNELTAKVRAIRGPQVLTARNIFAEP
VLNPHSEAWFAQNLDDFLVSYDWTAPMAMPLMEKQTHAQSGPWLEELVAKIKQRPGALDR
TVFELQARDWTKKDQADIDGAQLADWMGRLKRQGATSFGYYPDNFLENLPDLKTVRPALS
NKWNP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgccttttatttcgcgtttcatccttctgctgggagtgctgctggtcagcgcctgcgcc
cagcaagctccggccttcgcaccgccgtccgagcgcccggtggcggccaatgaaaaacca
tggccgaaaaaccacgtgcttggcattgcctaccatgacatcgaagaccgtgatcccgat
caggcggtggtggcggtgcgtaccgagcgcatgatcgagcaactggcgtggctgcgggaa
aacaactacaagccagtgacggtcgatcagatcatggccgcgcgcaagggcgggccggaa
ctgccgcccaaagcgatcctgctcagcttcgatgacggttacgcgagcttctacactcgc
gtgatgccggtgttgcgcgcctataactggcatgcgctactggcaccggtcggcgtctgg
atcgacacaccgctgaatcagccagtggatttcgccggcgccatgcgcccgcgttccgac
ttcctgacctgggatcaggtgcgcgaaatctcgcaatctggcctcgtggaaatcgccgcc
cacaccgacgccagccacaaaggcatcctcgccaacccgcaaggcaacatgcagccggcc
gccgcgacccgtcgttacgatccagtgaccaaacgttatgagtccgaggcggatttccag
gcgcggatccgcactgacgtcgccaccatttcggagaaaatccgcaaggccaccggcaag
aaaccgcgcatctgggtctggccatacggtacggcggacggcacttcgctgaccgtggtg
agcgagcagggttatgaaatggccctgaccctcgacgacggtctcgatgccctcgacaac
ctgatgagcagcccacggttcctcgtcgcctccgacccggacggcgagcatttcgccaac
agcatcgtggcggtgcagtccgatttcgccatgcgcgtggtgcatgtggacctggacaac
gtctacgacccggaccccgcgcaacaggaagtgaacctcggcaagctgatccagcgcatg
gccgacatgggtgccaacacggtgttcctgcaagccttcgccgatccgaaaggcgatggc
ctggtgcattcgctgtacttccccaaccgtcatctgcccatgcgtgccgacatcttcgac
cgtgtcgcctggcagctgcgcacccgggctcacgtgaaggttttcgcctggatgccggtg
ctgagttttgcgttggattcgaaattgccacgggtcacgcgctgggatccgaagaccggc
accacgtctgtcgacccggatcagtacaagcggctgtcgccgttcgaccccgaagtacgg
cggatcatcggtgaaatctacgaagacgtggcgcgcctgacttcggtcgacggcatcctc
taccacgacgacgccgtgctgtcggatttcgaggacgccagccccgaggctctgaaagcc
tatgccgcccacggtctgccgggctcgattgccgccctgcgcgatgatccggcagccatg
cagcgctggacgcgattcaagagccgctacctgatcgacttcaccaacgaactgaccgcc
aaggtacgcgcgattcgtggcccgcaagtgctcaccgcacgcaacatcttcgccgagccg
gtgctcaatccacacagcgaagcgtggttcgcgcagaacctcgacgacttcctcgtgagc
tacgactggacggcgccgatggccatgccgctcatggaaaaacagacccatgcgcaatcc
ggcccgtggctggaagaactggtggcgaagatcaaacagcgccccggtgcgctggatcgc
acggtgttcgaattgcaggcccgggactggacgaaaaaggaccaggccgacatcgacggt
gcacaactggccgactggatgggccgcctcaagcgtcagggcgcgacgagtttcggctac
tacccggacaacttcctcgagaacctgccggacctgaaaaccgtgcggcctgcgctctcc
aacaaatggaacccatga
DBGET
integrated database retrieval system
