Pseudomonas sp. HS6: JJN09_27615
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Entry
JJN09_27615 CDS
T09971
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00250
Alanine, aspartate and glutamate metabolism
pshs00310
Lysine degradation
pshs00350
Tyrosine metabolism
pshs00650
Butanoate metabolism
pshs00760
Nicotinate and nicotinamide metabolism
pshs01100
Metabolic pathways
pshs01120
Microbial metabolism in diverse environments
Module
pshs_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JJN09_27615 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JJN09_27615 (gabD)
00310 Lysine degradation
JJN09_27615 (gabD)
00350 Tyrosine metabolism
JJN09_27615 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JJN09_27615 (gabD)
Enzymes [BR:
pshs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JJN09_27615 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JJN09_27615 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JJN09_27615 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UQS14934
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Position
6119407..6120849
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELIIENQEDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPKGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKVAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVAKGATVLAGGKQ
MEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggtc
gacgcggacaacggtcagacgatcaaggtcaacaacccggccaccggcgaaatcctgggc
accgtgccgaagatgggcgctgccgaaacccgccgtgccatcgaagctgccgacaaggcg
ctgccggcctggcgtgcactgaccgccaaggaacgtgcaggcaaactgcgtcgctggttc
gagctgatcatcgagaaccaggaagacctggctcgcctgatgaccctcgagcagggcaag
ccattggccgaggccaagggcgaaatcgtctacgccgcttcgttcatcgagtggttcgcc
gaagaagccaagcgcatctacggtgacgtgattccgggccaccagcctgacaagcgcctg
atcgtgatcaaacagccgatcggcgtaaccgccgccatcaccccgtggaacttcccggcg
gcgatgatcactcgtaaagcaggcccggccctggctgccggttgcaccatggtgctcaag
cctgcatcgcaaaccccgttttccgctttcgccctggccgaactggcccagcgcgccggc
atccctaaaggtgtgttcagcgtggtgtccggcagcgccggcgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaactgtccttcaccggctcgaccgaaatcggtcgtcag
ctgatgtcggaatgcgccaaggacatcaagaaagtctcgctggaactcggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtttgcgccaaccgtctgtacattcaggattcg
gtctacgacgcgtttgccgagaagctgaaagtggctgtcgccaaactgaagatcggcaac
ggtctggaagacggcaccaccactggcccgctgatcgacgagaaagctgtggccaaggtg
caagagcacatcgctgacgccgttgccaaaggcgcaaccgtgctggccggtggcaagcag
atggaaggcaacttcttcgagccgaccatcctgaccaacgtgccgaaaaacgctgcggtg
gccaaggaagaaaccttcggtccgctggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgcgatgtcgaacgacaccgagttcggtctggcttcctacttctacgctcgcgac
ctgggccgtgtgttccgtgtggctgaagccctggagtacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgttcggcggcatcaaggcttcgggcctgggtcgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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