Pseudomonas sp. HS6: JJN09_27860
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Entry
JJN09_27860 CDS
T09971
Name
(GenBank) short-chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JJN09_27860
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Gene cluster
GFIT
Motif
Pfam:
SCFA_trans
DcuC
Motif
Other DBs
NCBI-ProteinID:
UQS14982
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Position
complement(6174516..6175934)
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AA seq
472 aa
AA seq
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MAVDIEDSRSARFALRCSSFAERWFPDSWVFAALAVIIVALATLAMGAKPTDAAMAFGDG
FWSLIPFTMQMAFVVIGGYVVASSPPAVKLIDRLARIPKNGRSAVAWVALISMVASLLNW
GLSLVFGGLLVRALARRTDLKMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
ILSITGVIPFTQTIFLWQSGVMLLALVVISIIIAYATAPGPNSARDAKACGIDPAFNLPP
LQPRTRPGEWLEHSPLLIIVLVLLAAGWLFHEFSTKPAITAISGLNTYNFLFIMLGALLH
WRPRSFLDAVARAVPTTTGVLIQFPLYGSIAALMTTVKGTDAQTLAHHISTFFVSIASHD
TYALLMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLNYHLGWAVQIYNAAEALPNLIN
PFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLLLLWALGTTLAYTPPVMP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtggccgttgatatcgaagatagccgctctgcgcgctttgccttgcgctgctcaagcttt
gccgaacgctggtttcccgactcctgggtatttgccgcactggcggtgattatcgtggcg
ctggcgaccctggccatgggggccaaacccaccgacgctgccatggcgttcggtgacggt
ttctggagcctgatcccgttcaccatgcagatggccttcgtagtcatcggtggttacgtg
gtggccagttcgccgcccgccgtgaaactgatcgatcgcctggcgcgaatcccgaagaac
ggccgctccgccgtggcttgggtcgcgctgatctcgatggtcgcgtcgttgctgaactgg
ggcctgtcgctggtgttcggcggtctgctggtgcgcgccctcgcacgccgcaccgatctg
aaaatggattatcgcgccgccggtgccgctgcctaccttggccttggcgccgtctgggcg
ttgggcctgtcgtcgtccgccgcgcagttgcaggccaaccccgccagtttgccgccatcg
attctgtcgattaccggggtgattccattcactcagacgatttttctctggcagtcggga
gtgatgctgctggcgctggtggtgatctcgatcatcatcgcctacgccaccgcaccgggt
ccgaactcggcgcgcgacgccaaggcctgcggcatcgaccccgccttcaacctgccaccc
ctgcaacctcgcacccgcccgggcgaatggctggagcacagcccgctgctgatcatcgtg
ctggtgctgttggcggccggatggttgttccatgagttttcgactaaacctgcgatcacc
gcgatttccgggctcaacacctataacttcctgttcatcatgcttggcgcgttgctgcac
tggcgcccgcgcagcttcctcgatgcagtggcgcgagcggtgccaaccaccaccggcgtg
ctgatccagttcccgctatacggctcgattgccgcgctgatgaccacggtcaaaggcacc
gatgcgcagactttggcccatcacatctcgacctttttcgtcagcatcgcttcccacgac
acctacgcgctgctgatgggcgtgtactcggcaattctcggcttctttattccatccggc
ggcggcaagtggatcatcgaggcgccgtacgtgatgcaagtggccaatgacctcaactat
cacctgggctgggcggtgcagatctacaacgccgccgaagccctgccgaacctgatcaac
ccgttctacatgctgccgctgctgggcgtgctggggttgaaggcgcgggacctgatcggc
ttctcgttcgtacaactgctggtgcacacaccgctggtgctgctgttgctgtgggcgctg
gggacgacgttggcgtatacgccgccagtgatgccgtaa
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