Pseudomonas sp. HS6: JJN09_28360
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Entry
JJN09_28360 CDS
T09971
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K21133
multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_28360
Transporters [BR:
pshs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JJN09_28360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UQS15078
LinkDB
All DBs
Position
6278263..6281364
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AA seq
1033 aa
AA seq
DB search
MKQHKGVSTWCIDHPVATILLTIALVLVGVIAFPRLPIAPLPEAEFPTIQVSAQLPGASP
DTMASSVATPLEVQFSAIPGMTQMTSSSALGSSLLTLQFTLDKSIDTAAQEVQAAINTAA
GKLPKDMPTLPTWKKVNPADSPVLILSVSSTQMPGTELSDLVETLLSRQISQIDGVGQIN
ITGQQRPAIRVQASADKLAAIGLTLADIRLAIQQTSLNLAKGALYGESSISTLSTNDQLF
HPEEYSQLIVSYKDGAPVHLKDVAKVVNGSEDAYVQAWAGDQPGVNLVISRQPGANIVET
VDRIQAALPGLEAMLPASVQVKVLIDRTQTIRASLHEVEITLLIAILLVVAVMALFLRQL
SATMIVSAVLGVSLTASFALMYLLGFSLNNLTLVAIVVAVGFVVDDAIVVVENIHRHLEA
GDSMREAAVKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTIMISVV
VSLTLAPTLAALFMRKPVHHAHDKPGFSERLLGWYEKGLRRALAHQKLMIAVFGVSVAMA
IGGYIFIPKGFFPVQDTGFVLGTTEAAADISYSDMVKKHLAMAEIVAADPAVQAFSHSVG
VSGSNQTIANGRFWIALKKRGDRDVSASQFIDRIRPQLMKVPGIVLYLRAGQDINLSSGP
SRAQYQYVLKSNDGPTLATWTQKLTEKLRSNPAFRDISNDLQLGGSITHISIDRSAAARF
GLTASDVDEALYDAFGQRQINEFQTQVNQYNVILELDTKQRGKAESLNYFYLRSPLSGEM
VPLSALARFDAPTIGPLSIAHDGMFPAANLSFNLAPGVALGDAVILLNQAKAEIGMPTAI
SGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPAAGLGAVIM
LWICGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRHRGLSPQDAIFEACITRFRPI
IMTTLAALLGALPLMLGYGTGAELRQPLGIAVVGGLLVSQMLTLFTTPVIYLWLERLFHK
PKPSPVAALATTD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcacaaaggcgtttcgacctggtgcatcgatcacccggtggcgacgattttg
ctgaccatcgcgctggtgctggtcggggtgattgccttcccgcgcctgccgattgccccg
ctgccggaagcggaatttccgacgatccaggtctccgcccaactgcccggcgccagcccg
gacaccatggcctcgtccgtggccacgccgctggaggtgcaattcagcgccattcccggc
atgacccagatgacctccagcagtgcgctgggctccagtctgctgaccctgcaattcacc
ctcgacaagagcatcgacaccgccgcccaggaagtgcaggccgcgatcaacaccgccgcc
ggcaaactgccgaaagacatgccgaccctgccgacctggaagaaggtcaacccggcggac
agcccggtgttgatcctcagcgtcagctcgacccagatgcccggcaccgaactcagtgac
ctggtggaaaccctgctgtcgcgtcagatcagtcagatcgatggtgtaggccagatcaac
atcaccggtcagcaacgtccggcgattcgcgtgcaggcctcggcggacaaactggcggcc
atcggcctgaccctcgccgacatacgtctggcgatccagcagaccagcctcaacctcgcc
aaaggtgcgttgtacggcgagtcgagcatttccaccctgtcgaccaacgaccagttgttc
caccccgaggaatacagccagctcattgtttcctacaaggacggtgcaccggttcacctg
aaagatgtcgccaaagtcgtcaacggttcggaagatgcctacgtgcaagcgtgggccggc
gatcaaccgggggtgaacctggtgatctcccgccaacccggggccaacatcgtcgagacc
gtggatcgcattcaagccgccctgcccggcctcgaagccatgctgccggcctcggtgcag
gtcaaggtattgatcgaccgcacccagaccattcgcgcttcgctgcatgaagtggaaatc
accctgctgattgcgatcctgctggtggtggcggtaatggcgctgttcctgcgccaattg
tcggcgacgatgatcgtgtccgcggtgctcggcgtgtcgctgaccgccagtttcgccttg
atgtacctgctcggcttcagcctgaacaacctgacgctggtggccatcgtggtggcggtc
gggttcgtcgtcgacgatgccatcgtggtggtggagaacattcaccgtcacctggaagcc
ggcgacagcatgcgcgaagcggcggtcaagggcgccggcgagatcggtttcaccgtggtc
tcgatcagtttctcgctggtggccgcgttcattccgctgctgttcatgggcggcgtggtc
gggcgtttgttcaaggaattcgccctgacggccacctcgaccatcatgatttccgtggtg
gtgtcgttgacgttggcgccgacactggcggcgctgttcatgcgcaaaccggtgcaccac
gcccatgacaaaccgggtttcagcgaacgcctgctcggctggtacgaaaaaggcctgcgc
cgcgccctcgcccaccagaaactgatgatcgcggtgtttggtgtttcggtggcgatggcc
attggcggttacatctttatccccaaaggcttctttccggtgcaggacaccggtttcgtc
ctcggcaccaccgaagccgccgccgatatttcctacagcgacatggtgaaaaagcacttg
gcaatggccgaaatcgtcgccgccgacccggccgtgcaggcgttttcccattcggtcggc
gtgtccggcagcaaccagaccatcgctaacggccgcttctggatcgccctgaaaaaacgc
ggtgatcgcgatgtttccgccagccagttcatcgaccgcatccgcccgcaactgatgaaa
gtccccggcatcgtgctttacctgcgcgcaggccaggacatcaacctcagctccggcccg
agccgtgcgcagtatcaatacgtgctcaagagcaacgacgggccgacgctcgccacctgg
acccagaaactcaccgaaaaactgcgcagcaacccggcgttccgcgacatttccaacgac
ctgcaactgggcggcagcatcacccacatcagcatcgaccgcagcgccgccgcgcgattc
ggcctgacggcgagtgatgtcgacgaggcgctgtacgacgccttcgggcagcggcagatc
aacgagttccagacccaggtcaaccagtacaacgtgattctggaactggacaccaaacag
cgcggcaaggctgaaagcctcaactatttctacctgcgctcgccactgagcggagaaatg
gtgccgctgtcggcgctggcccgattcgacgcgccaaccatcggcccgctgtccatcgct
cacgacggcatgttcccggccgccaacctgtcgttcaacctggcgcccggcgtggcgttg
ggcgacgcggtcatcctgctcaatcaggccaaggccgagatcggcatgccgaccgcaatc
agcggtaacttccagggtgcggcccaagcattccagagttcgctggccagccagccatgg
ctgattctggcggcgctggtggcggtgtacatcattctcggtgtgctctatgaaagcttt
gtccatccgctgacgatcatctcgaccctgccagcagcaggccttggcgcggtgatcatg
ctgtggatctgcggccaggacttttcgatcatggctttgatcgggctggtgttgctgatc
ggcatcgtgaagaaaaacggcatcctgatgatcgacttcgcccttgaagcgcagcgtcat
cgcgggctgtcgccgcaagacgcgattttcgaggcgtgtatcacgcggttccggccgatc
atcatgaccaccctcgccgccctgctcggcgccctgccgctgatgctcggctacggcacc
ggcgctgaactgcgccagccgctggggatcgccgttgtcggcggcctgctggtcagccag
atgctgacgctgttcaccacaccggtcatatacttgtggcttgagcggctgttccacaag
cccaaaccatcgcccgtcgcggcgctggcaacgacagactga
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