Pseudomonas sp. HS6: JJN09_28380
Help
Entry
JJN09_28380 CDS
T09971
Name
(GenBank) OprD family porin
Organism
pshs
Pseudomonas sp. HS6
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
UQS15082
LinkDB
All DBs
Position
6283988..6285304
Genome browser
AA seq
438 aa
AA seq
DB search
MRYPVRFTPLFIAIAATIAPAAHAAEPEKEGFVEGSSLNLNARNYYMNRNRLQKADDNIE
WGQGFLGKFQSGYTEGTVGFGIDAHAMLGLKLDGGGGTDNSSILPVSDGNGKAPGSFSTA
GGTLKMRAFDTELKAGDLFLTNPVIAGGESRMLPQTFRGVSLTNHSFDGWMIEGGQASFT
KPYNQSGHKRIGTSYGTLAEHDDSQHLNWAGVAWSGVEGLTSSLYASELKDIWNQYYYDL
DYTWALNDLVTLNPGLHFYHTQDTGDALLGNIDNNTYSLHFTVGIGSHSVTAAYQRVNGN
TPFDYISQGDSIYLDNSQQYSDFNGPNERSWKLKYAYDFAGVGMPGLTSAVSYSRGTLDL
TKVDPDSKGYASWYSAEGRNAKHWERDIDLKYVVQSGQAKDLAVRLQWATNRGGNGYGAL
DTDTDEYRVIIDYPINVF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcgttacccagttcgcttcactccgctgttcattgcaattgccgcaacgattgccccc
gccgcccacgccgccgaacccgaaaaagaaggtttcgtcgaaggctcgagcctcaacctc
aacgcccgcaactactacatgaatcgcaaccgcttgcagaaagcggacgacaacatcgag
tggggccagggtttcctcggcaaattccaatcgggctacaccgaaggcacggtcggtttc
ggcatcgatgcccacgccatgctcggtctcaaacttgatggcggtggcggtacagacaac
tccagcatcctgccggtcagcgatggcaacggcaaagcgccgggttcgttctccaccgcg
ggcggcaccttgaaaatgcgcgcgttcgataccgaactgaaggccggtgacctgttcctc
accaacccggtgatcgccggcggtgaaagccgcatgctgccgcagacctttcgcggtgtc
agcctgaccaaccacagcttcgacggctggatgatcgaaggcggccaggccagcttcacc
aaaccgtacaaccagagcggtcacaaacgcatcggcacctcgtacggtacactcgccgaa
cacgatgacagccagcacctgaactgggccggcgtggcctggagcggtgtcgaaggcctg
accagcagtctgtatgcttccgagctgaaggacatctggaaccagtactactacgacctc
gactacacctgggcgctgaacgatctggtgaccctcaacccgggcctgcacttctatcac
acgcaggacaccggcgacgcgttgctgggcaacatcgacaacaacacctacagcctgcat
ttcaccgtcggcatcggcagccacagcgtcaccgccgcgtaccagcgggtcaacggcaac
acgccgttcgactacatcagtcagggcgacagcatctacctcgacaactcccagcagtac
tcggacttcaacggcccgaacgagcgctcgtggaaactcaaatacgcctacgacttcgca
ggcgtcggcatgcctggcctgacctcggcggtatcgtactcgcgcggcacgctggacctg
accaaggtcgacccggacagcaagggctacgcctcgtggtacagcgccgaaggtcgcaac
gccaagcactgggagcgcgacatcgacctcaagtacgtggtgcaaagcggccaggccaaa
gacctggcggtacgcctgcaatgggcgaccaaccgtggcggcaacggttacggtgcactg
gacactgacacagatgaataccgtgtgatcatcgactacccgatcaacgtcttctaa
DBGET
integrated database retrieval system
