Pseudomonas sp. HS6: JJN09_28645
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Entry
JJN09_28645 CDS
T09971
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_28645
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_28645
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF373
Motif
Other DBs
NCBI-ProteinID:
UQS15126
LinkDB
All DBs
Position
complement(6340510..6342669)
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AA seq
719 aa
AA seq
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MFARFFALPCLFLVCLMTLLPSAPAHAVSLPGLLNGSNKAQPEAQEPLGQSLDEVIKSLE
NDKQRAQLLSDLKKLRDATKKAQATPEEGVLGLIGGTLATFEKQFTGADSPLNRWSAEFD
LAKDELSDLMLPASEWLPIIFAFAVILAVWSLLAAALIWLGHRVRMRFGLTEELPQNPRA
LDMLRFALRKLGPWMIALAITVYMSYALPSSLGKSLAMVLAYALVVGTCFSAICVIAFSV
LDGPHRHRALYILRHQAFRPLWLIGSFAAFGEALNDPRLVSGLGVHLAHTAATVANVLAA
LSTGLFILRFRRPIAHLIRNQPLSRRLTRRALSDTIEILGTFWYVPALVLVGISLFATFV
SAGDTSTALRQSLICTVLLVLCMVINGLVRRHALKPQRGPKRHALYSERLKSFFYTLAHL
LVWLAFIELGLRVWGMSLIGFTEGEGHDVSVKLFSLIGTLIFAWLIWILSDTAVHHALTR
SRKGLANARAQTMMPLIRNVLFVAIFIIALIVALANMGMNVTPLLAGAGVIGLAIGFGAQ
SLVADLITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKS
IKNYSREFGYAIFRVAVPFNMNIDEAIKLMREVGQKMRTDPLQRRNIWSPLEIQGVESFE
SGNAILRARFKTAPIKQWEVSRAFNLSLKRHLDEAGLDLATPRMNVQVITAGGGGQTQE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgctcgtttctttgccctgccctgccttttcctcgtctgcctgatgacgctgctg
ccgtcggcgcctgcccacgcggtgagcctgcccggcctgctcaatggctcgaacaaggcg
caaccggaggctcaggaaccactcggccagtccctcgacgaagtcatcaagtcgctggaa
aacgacaagcaacgcgcccagttgctgagcgacctgaaaaagctgcgcgacgccacgaaa
aaagcccaggccaccccggaagaaggcgtgctgggcctgataggcggcaccctcgccacc
ttcgaaaaacaatttaccggtgccgacagcccgctcaatcgctggtccgccgagttcgat
ctggccaaagacgaactgtccgacctgatgctgccggccagcgaatggctgccgatcatc
ttcgccttcgccgtgatcctcgccgtctggagccttctcgccgccgcactgatctggctc
ggccaccgggtgcgcatgcgcttcggcctgaccgaagaactgccacaaaacccccgggcc
cttgacatgctgcgcttcgccctgcgcaagctcggcccatggatgattgccctggccatc
acggtttacatgagctacgcgctgccgtcgtcgctgggcaaaagcctggcgatggttctg
gcttatgcgctggtggtcggcacctgcttctcggcgatctgcgtgattgctttctccgta
ctcgacggcccgcaccgccatcgtgcgctgtacatcctgcgccatcaggccttccgtccc
ttgtggctgatcggcagcttcgccgcgttcggcgaagccctgaacgacccgcgactggtc
agcggcctgggcgtgcacctggcacacaccgcggccaccgtcgccaatgtgctcgcggcc
ctgtcgaccggcctgttcatcctgcgcttccgccgcccgatcgcccacctgatccgcaac
cagccactgtcccgccgcctgacccgccgcgccctcagcgacaccatcgaaatcctcggc
accttctggtacgtgccggcgctggtcctcgtggggatttccctgttcgccaccttcgtc
tccgccggcgacaccagcaccgccctgcgccagtcgctgatctgcacggtgctgctggtg
ttgtgcatggtgatcaacggcctcgtccgccgccacgccctcaaaccccaacgcggcccg
aaacgccacgcgctgtattccgaacgcctgaaaagcttcttctacaccctcgctcatttg
ctggtgtggctggccttcatcgaactcggcctgcgggtctggggcatgtccctgatcggc
ttcaccgaaggcgaaggccacgacgtcagcgtcaaactgttcagcctgatcggcacgttg
atcttcgcctggctgatctggatcctcagcgacaccgccgtccaccacgccctcacccgc
tcacgcaaaggcctggccaacgcccgtgcacaaacgatgatgccgctgatccgcaacgtg
ctgttcgtggcgatcttcatcatcgccctgatcgtcgctctggcgaacatgggcatgaac
gtcacgccactgctggccggtgccggcgtgatcggcctggcgatcggcttcggcgcccag
tcgctggtagccgacctgatcaccggcctgttcatcatcatcgaagactccctggccatc
gacgactacgtcgacgtcggcggccacttgggcaccgtcgaaggcctgaccatccgcacc
gtacgcctgcgggacatcgacggcatcgtccacaccatcccgttcagcgaaatcaaaagc
atcaaaaactactcccgggaattcggctacgcgatcttccgcgtggcggtgccgttcaac
atgaacatcgacgaagccatcaaactgatgcgcgaagtcggccagaaaatgcgtaccgac
ccgctgcagcgccgcaatatctggtcgccactggagattcagggggtggaaagttttgaa
tcgggtaatgcgatattgcgcgcaaggttcaagactgcaccgatcaaacagtgggaagtt
tcacgggcgttcaatctgtcgctgaaacggcatctggatgaggccgggctggatctcgcg
acgccgaggatgaatgttcaggtgataaccgcaggtggtggtggccaaactcaggaatag
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