Planococcus shixiaomingii: QWY21_01880
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Entry
QWY21_01880 CDS
T10328
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pshx Planococcus shixiaomingii
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_01880
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QWY21_01880
Archaeal homologous recombinant proteins
QWY21_01880
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_3
Lipase_GDSL
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
WKA55155
LinkDB
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Position
346068..347234
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AA seq
388 aa
AA seq
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MKFFHTADWHLGKLIQGVYMTDEQRFVLNQLIAAIEEEQPDAVVIAGDLYDRAVPPTEAV
NLLDEVLAKIVLELNTPVLAVAGNHDSPGRLNFGSRIMKMNGIHIAGHVQRDHEPVVLTD
EHGEVHFHLIPYTDPSLVKYTLENPEVRSHNDAMKAITENIKTSLDPNARHVLVGHAFVT
PHGEQENNTSDSERPLSIGGAEHVAAHHFDSFHYTALGHLHKAHYVLNETVRYAGSPLKY
SISEEKHQKGFHVVELDAAGQVTVEKRLFVPNRDMRTVEGTIEEILTHEFNEDFVFVKLL
DDAPVLYPMEKVRSVYPNAMHVERKNLIGNSAQSETGARRKMDSLSLFKAFYEEVKGEAA
SKETEAIFKDVVDEFLNEESDKKEGVNV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttccacactgccgattggcatttaggcaagctgattcaaggtgtttacatg
acagatgaacaacgatttgtcctaaaccaattaattgctgccatagaagaagaacaacca
gacgctgtcgtcattgcaggagatttgtacgaccgagcggttccgccgactgaagcagtc
aatttgcttgatgaagtattggccaaaatcgtcttggaattgaacactccggtgcttgcc
gtagcaggcaaccacgacagtcctggccgcttgaatttcggcagccgcatcatgaagatg
aatggcatccacattgcgggacatgtccaaagggaccacgaaccggttgttttgacggat
gagcacggggaagtgcattttcaccttatcccgtataccgatccgtcgctggttaagtac
acacttgaaaatccggaagtccgttcacataatgatgcaatgaaagcgatcactgaaaac
attaaaacatcactcgacccgaatgcccggcatgttttggtgggccatgcattcgtgacg
ccgcacggcgagcaagaaaacaatacgagtgactccgaacggccgttatcaattggcggg
gcagaacatgtcgccgcacatcattttgacagtttccattacactgcgctcgggcatttg
cacaaagcccattatgtgctgaatgaaaccgtacgctatgcaggttctcctttaaaatat
tcgatttcagaagaaaagcaccaaaaaggctttcatgtcgttgaactggatgccgcaggg
caggtgacggtcgaaaagagattgtttgttccgaatcgcgatatgcgcacagtggaaggc
acaatcgaagagattttaactcatgaattcaatgaagactttgttttcgttaagttgctg
gatgacgcaccggttttatatccaatggaaaaagtccgttctgtttatccgaacgccatg
cacgtggagcggaaaaacttaatcgggaattctgcacaaagcgaaacaggagcccgtcgg
aaaatggactcactgtctttattcaaagctttttacgaagaagtgaaaggcgaagcagct
tcaaaggaaacagaagcgattttcaaagacgtcgtcgatgaatttttaaacgaagaaagc
gataagaaagaaggggtgaatgtatga
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