Planococcus shixiaomingii: QWY21_05030
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Entry
QWY21_05030 CDS
T10328
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pshx Planococcus shixiaomingii
Pathway
pshx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWY21_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshx03000
]
QWY21_05030
Transcription factors [BR:
pshx03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWY21_05030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_19
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WKA55756
LinkDB
All DBs
Position
1006184..1007422
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AA seq
412 aa
AA seq
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MNVGSVIKYYRSKHNLTQQQLADGICSISHLSKIESNSYIPHESTTQALLAKMGVQWKTE
IDKHKQLERELGKFIDCSIYFDLNAMRKQYEELEQEIDYIQSTELVNQFELYKFRYYIFD
EDYEQAECQKNLLERLKGSFTAPEKWLHQFFLSVYYSMKGQAEHSLKLLENLEEGIQSIP
QKFEGEYYYQKARLLILHDRYERSAYYAELAVQHYQLHYNYIRLLHAQLLLAINYTKRNL
LVQAVGLYEALKRNSQITGQTELYYQTVYNYAELLKQREKNDEALLQLQEIKDRLPKDSY
FYKAVLVSALEAAVETGEDVSHLIHELKAAITDKNDTYFQVYAEYFEKRSFSQSNLLNYY
EEKMFPFFRKNGYIKEAKKVSSQLALFYQKKKEWEKAHFYSTYHEMNGGEFI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaggttctgtcattaaatattatcgttcgaaacacaacctcacacagcaacaa
ctggcagacggtatttgttcgatatcgcatttaagcaaaattgagtcaaattcttatata
cctcatgaatcgactactcaggctttgcttgccaaaatgggagtccagtggaaaacagaa
attgacaaacacaaacaattggagcgcgagcttggaaaattcattgattgctctatttat
ttcgatctcaatgctatgcgtaaacaatatgaagaactggaacaggaaattgattatatc
cagtcaacagaactcgtgaatcaatttgaactttacaaattccgctattatatatttgat
gaagattatgaacaggcagaatgccaaaaaaacttgttagagcgccttaaagggtctttt
accgctcctgagaaatggcttcatcaattttttctttctgtttattactccatgaagggg
caagcagaacattcgctgaagttattagagaacctggaagaagggattcaaagcatccct
caaaaatttgaaggagagtattattatcagaaagcaagattgcttattctccacgaccgc
tacgaacgttctgcttattatgcagagctcgctgtacagcattaccagctccactataat
tacatccgccttctgcatgcccaattgctgttggccatcaattacacaaaaagaaatctt
cttgttcaagcagttggattatacgaggccctgaagcgcaattctcaaataaccgggcaa
accgaactttattatcagacggtttataattatgcggaactgcttaaacaaagagaaaaa
aatgacgaagctttgctgcagcttcaagaaataaaagaccgtcttccgaaggattcttat
ttttacaaagcagttctggtcagtgcgctagaagccgcagttgaaacgggggaagatgtg
tcccatctcatccatgaattgaaagcagctattacagacaagaacgatacgtatttccaa
gtctatgcagagtatttcgaaaagcgaagtttttcccaatccaatcttttgaactattat
gaagaaaaaatgttcccatttttcagaaaaaatggttatataaaggaagctaaaaaagtt
tcttctcaactggctcttttctaccagaaaaagaaagagtgggaaaaagctcacttctac
agcacttatcatgagatgaatggtggtgaatttatatga
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