Planococcus shixiaomingii: QWY21_07390
Help
Entry
QWY21_07390 CDS
T10328
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03030
DNA replication
pshx03430
Mismatch repair
pshx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWY21_07390 (dnaE)
03430 Mismatch repair
QWY21_07390 (dnaE)
03440 Homologous recombination
QWY21_07390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshx03032
]
QWY21_07390 (dnaE)
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_07390 (dnaE)
Enzymes [BR:
pshx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWY21_07390 (dnaE)
DNA replication proteins [BR:
pshx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWY21_07390 (dnaE)
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWY21_07390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WKA56725
LinkDB
All DBs
Position
1462888..1465944
Genome browser
AA seq
1018 aa
AA seq
DB search
MVYPYISTSADLLKSTVRLDELFPFLKEQGTASVAIVNTKMYGILPFWEACSRAGIHGVI
GFSTCIEFEELTLPIVLYAKTNEGYSNLLKISSALATRDKKAIPEQWLKAYKNGLICVVP
NKIEWVMTDRTPAFRYVKSIFGGDCFGSVERPGGEKSPEETAFLQTCQAAEMSIIATQES
RYMKEQDAFAFEVASAIGQGLKLNDPQRERPVHTKAYVPAAEELRAWFSDQPEWLEETAR
MLENCQVTIPMNRQLLPVFPLAESVDRSQYIAELCKKGLEERIPNYSSDYQNRLDYELSV
IGKMGYIDYFLIVTDFMKFARDNEILTGPGRGSSASSLVAFSLRITDVDPLEHGLLFERF
LNPERVTLPDIDIDFADYRRHEVVEYVARKYGEARTAQIITFGTLSAKAVARDTARVFGF
EAEELDAISKMIPNRPGTTLKSALKESPHLNNWIVEKEERKTWFKTAIKLEGLPRHASTH
AAGVILSPSPLVDHVPIEKGNEGIYITQWPMQDLEAVGLLKMDFLGLRNLTLLEHIRRLM
LFDKKVRIDYRKLPLTDPETFSLLAHGDTTGVFQLESDGMRRALKEIRPTAFGDIVAVNA
LFRPGPMEFIHLYAKRKHRKEKVVYVHPILEPILKETHGVIVYQEQIMQIAAAMAGFSYG
EADLLRRAVSKKKREILDEERLHFVRGALSKGFPESAATAVYDLIVRFADYGFPKSHAVA
YSMISYQLAYMKTHYAVYFYAALLSTNTGNAEKIKALLQEIKEKKIPLLPPSVQKSTGSF
TVENGKIRIGLSSVKGVPATAIKALLSARKEGAFSSMFNIAERISAIHFTRKAFEPLIKA
GALDDFELDRGILLASLDSAVKHAELVKPDEEPGLFDDMGTSFMKPKYAQASPIPDNLKL
DFEKDVLGFYLSPHPIESEKEKRNKPYADLNGVKNRRDKELVTVLGLVEDIKRIRTKKGD
AMAFVTLQDETGPASLTLFPAEYAKYNALLEPHAMLEVHGVIENRNQQSAIICKSIHL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtttatccgtatataagcacgtcggctgatttgctgaaaagcacggtgcgcctagac
gaactattcccttttttaaaggaacagggcacagcttcagttgcaatcgtcaatacgaaa
atgtacggcattcttcctttttgggaagcgtgcagccgcgcaggcattcatggggttatc
ggcttttcgacatgcattgaatttgaagaactgacgcttccgattgtgctatatgccaaa
acgaatgaaggctacagcaatcttttgaaaatttcgagtgcgctggcgacgcgtgataaa
aaagcgattccggaacaatggctgaaagcatacaaaaatgggttgatttgcgttgtgcca
aacaaaatagagtgggtgatgactgaccggactccggcctttcgttacgtgaaatccatt
ttcggaggcgattgtttcggcagcgtagaacgtccaggcggcgaaaagtctcctgaagaa
actgcatttttgcaaacatgccaagcagcggagatgtccattattgcgacacaggaaagc
cgctatatgaaggagcaggatgcttttgcgtttgaagtggcttctgccatcggccaagga
ttaaagctgaacgacccacagcgtgagcgccctgtgcatacaaaagcgtacgtccctgca
gcggaagaactccgcgcttggttctctgaccagcccgaatggctggaagaaacagcgcgc
atgctcgaaaactgccaagttacgattccgatgaaccggcaattgctcccggtctttcct
ttagcagagagcgttgatcgttctcaatatattgctgaactttgcaaaaaaggattggaa
gaacggattcccaattattccagtgactatcagaaccggttggactatgagctgtcggtc
atcggaaaaatgggctatatcgattatttcttgatcgtgacggattttatgaaatttgcc
cgagacaatgaaattttaaccggacctggacggggatcttctgcaagttcgctcgttgct
ttttcgttgcgaattacggatgttgatcctctcgaacacggcttgctgtttgaacggttt
ttaaatccggagcgggtgacgctgccggatatcgacattgactttgcggattaccggcgc
cacgaagtggtggaatacgtagctcgtaaatacggggaagcgcgcaccgcacaaattatc
acgttcggaacgctatcggctaaagcggtagccagggatacggcgcgggtttttggtttt
gaggcggaagaacttgacgccatatcgaaaatgataccgaaccggccgggcaccacatta
aaatccgctttgaaagaatcccctcacttgaacaattggattgttgaaaaagaagaacgc
aaaacctggttcaaaacagctataaagctggaagggttgccgcgccatgcatctacgcat
gctgccggggtcatattaagcccatctccgcttgtggaccatgtgccgattgaaaaaggc
aatgaaggaatttatataacgcaatggccgatgcaggaccttgaagcggtcggcttgttg
aaaatggattttttagggctgcgaaatttaacgcttcttgaacacatccggcgtttgatg
ctgttcgataaaaaagtgcggatcgattacaggaaactgccgttgaccgatccagaaacc
ttttctttgctggctcatggagatacaaccggtgttttccaattggaatcggatggaatg
aggcgggcactgaaagaaatccggccgactgcatttggcgacattgtcgccgtcaatgcc
ttgttccgtccaggtccgatggagtttatccatttgtatgctaaacgcaagcacaggaaa
gaaaaggttgtttacgttcatcccatactggagccgattttaaaagaaacgcatggcgtc
attgtctatcaggaacaaatcatgcagattgctgctgcaatggccgggttttcatacgga
gaagcggatttgctgcgacgggcagtcagcaaaaagaaacgggaaattttggacgaagaa
cgccttcattttgtccgcggagctttatcaaaaggctttccagaatcagccgcgaccgcg
gtatatgatctgatcgtccgatttgcagattacggctttccgaaaagccacgccgttgcc
tacagcatgatttcctatcaattggcctatatgaaaacccattacgctgtttacttttac
gcggcgctgttgtcgacaaataccggcaatgcggaaaagatcaaagcgctgttgcaggaa
ataaaagaaaagaaaataccgttgcttcccccgtctgtccagaagagcactggctctttt
actgtagaaaacggcaagatccgcattggcttgagttcggtgaaaggggtgccggcaact
gccatcaaagcgcttctctcggcacgaaaagaaggggcattcagcagcatgttcaatatc
gccgaacgcatttccgccatccactttacgcgcaaagcatttgaacctttgattaaagcg
ggagcgcttgatgattttgagttggaccgtggcatactgttagcttcactggacagcgct
gtcaagcatgcggaacttgtaaaacccgatgaagaacccggcctcttcgacgacatgggg
acaagcttcatgaaaccgaaatatgcccaggcttctccaataccagacaacttgaaattg
gattttgagaaagacgttctcgggttttatttgtctcctcaccctattgaaagtgagaag
gaaaaacgcaacaagccgtacgctgatttgaacggagtgaaaaaccggagggacaaagaa
ctggtcactgttcttgggctagttgaggacatcaaacgaatcaggacgaaaaagggtgat
gccatggcctttgtgaccttgcaggacgaaaccggaccggcttctctgactcttttcccg
gcagaatacgcgaaatacaatgcattgttggaacctcacgccatgctggaagtacatggt
gtcatcgaaaatcgcaaccagcaaagcgctatcatatgcaaatccatacacctttga
DBGET
integrated database retrieval system
