Planococcus shixiaomingii: QWY21_08020
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Entry
QWY21_08020 CDS
T10328
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03410
Base excision repair
pshx03430
Mismatch repair
pshx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QWY21_08020 (recJ)
03430 Mismatch repair
QWY21_08020 (recJ)
03440 Homologous recombination
QWY21_08020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_08020 (recJ)
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QWY21_08020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QWY21_08020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QWY21_08020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
GerD
Motif
Other DBs
NCBI-ProteinID:
WKA56278
LinkDB
All DBs
Position
1590664..1593006
Genome browser
AA seq
780 aa
AA seq
DB search
MIESKKRWRLTTPDSELVAAIQQELSISSVLAKILVTRGITSAEEARSFMDMDESKVHNP
YLMKDMDVAVARIRQAIEENQKIIVYGDYDADGVSSTTVMLTVLQDLGADVSFMIPNRFK
HGYGPNKELFKQASDEGAKLLITVDNGISGIEEVDYAVSLGLDVIISDHHDIGDVMPNAL
AIIHPRHPEGNYPFGELAGVGVAFKIAHALYEEMPEHLLEMVAIGTIADLVPLHDENRFL
VKEGLAALRTSPRAAIEALCEVSGVKQLDITEETIGFMFGPRINAIGRLQDADPAVQLFM
TDDPAEARDLASSLDLLNKERQAIVKQIADEAAAQVEARYPDGPPRVIVVAQEGWNPGVV
GIVASKLTEKYYRPSIVLCLNPETGKAKGSARSIEGFHLYNELAANRDILPHFGGHPMAA
GMTLDLAHVDELRERLNKQAETSLSEEDLIPVVEIDIPVRLDEIDIATIESMRFLAPFGM
GFSKPKFFLDGVKVSSIRKIGAAQNHLKMELVQNAVTLDAVGFGIGSVGDELTPDVQIDI
IGDLQINEWNGRKKPQLLIEDVRTDEWQLFDIRGIRQVSRWSKLIPEKDQVFLAFKPETA
TLFKSMINDPIYGIETLEALENPKHHLVLLDLPDSEEQLAQVLSELRPKRIYAHFYAKDS
QYFEQIPTREQFAWLFSFIKKRGSFDFKKHCDELAKHKGWTREAIFFMLQVFFELGFVTL
KNGITEVAQAPSKRDLSEAPIYKQREQQIALEQKLLYASYKDLKEWFDTKLSAKEEKIWI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatccaaaaaaagatggcgcttgacaactccggacagcgagttggttgcagcc
atccaacaagaattatccatatcatcggtattggctaaaatattagtgacccgcggcatc
acctcggccgaagaagcacgcagtttcatggacatggacgaaagcaaggtacataatccg
tatttgatgaaagatatggatgttgcagtagcccggattcgccaagccattgaagaaaat
caaaaaatcattgtctacggtgattatgacgcagacggagtctcgagcacaacggtcatg
ctgacggttttgcaggatttaggggcagatgtgtcgtttatgatcccgaatcgttttaaa
cacggctacggcccgaataaagaactgttcaagcaagcatcggatgaaggagcgaaactc
cttataaccgtcgataacggaatctcaggaatcgaagaagtggattatgccgtcagcctt
gggctcgatgtcatcatcagtgaccatcacgatatcggggatgttatgccgaacgcgttg
gccatcattcatccgcggcatccggaaggcaattacccattcggggagcttgcgggtgtc
ggcgtcgcgtttaaaatcgcgcacgccttgtacgaggaaatgccagagcatttgctcgaa
atggtagcgatcggcacgattgccgatttagtgccgctgcatgatgagaaccgctttcta
gtgaaagaagggctggctgcgctgcgtacttcgccgcgtgccgctattgaagcgctgtgt
gaagtttctggcgtcaaacagctcgatattacagaagagacgatcgggttcatgttcgga
ccgcgcatcaacgccattggccggctgcaggatgccgacccggcagtccagctgttcatg
acggatgatccggctgaagcgcgggatttggcgagcagcctggaccttctgaacaaagaa
cggcaagccatcgtcaagcaaattgctgacgaagcggctgcgcaagttgaagcgcgttat
ccagacggcccgccgcgcgtaatcgtggtggcgcaagaaggatggaatccaggtgttgtc
ggaattgtagcctctaaattgacggagaaatactaccggccgtcaatcgtcttgtgcttg
aatccggaaaccggaaaagcgaaaggttcagcgcgcagcatcgaaggcttccatctttat
aacgaattggcagcaaaccgcgacattttgccgcatttcggcggacatccgatggcggcc
ggcatgacgcttgaccttgctcatgtcgacgaattgcgggaacgcttgaataaacaagca
gaaacgagcctgtcggaagaagatttgattccggtagtcgaaatagacattccggtgcgt
ttggatgaaattgatattgcgaccatcgaatctatgcgttttcttgccccctttggcatg
ggcttttccaagccgaaatttttcttggatggcgtaaaagtgtcgtcaatccggaaaatc
ggcgcggcccaaaatcatttgaaaatggagctcgtccaaaatgccgtgacgcttgatgcg
gtcggatttggcatcggttctgtcggggacgaattgacgccggatgtccaaattgatatc
atcggcgatttgcagatcaatgagtggaacggccgcaaaaagcctcagttattgattgaa
gatgttcggaccgacgaatggcagttgtttgatattcgcggcatccgccaagtgtctcgc
tggtcaaaactcataccggaaaaagaccaagtgtttttggcattcaaaccggaaactgcg
actctttttaaatcgatgatcaacgatccgatttatggaatcgagactcttgaagcactg
gaaaatccgaaacaccatcttgtcttgctggatctgccggatagtgaagagcagctggcc
caagttttgtcagaattaagaccaaaacggatttatgctcatttctatgcgaaagactca
cagtattttgaacaaatcccgacgcgggaacagtttgcgtggctgttttcgttcattaaa
aaacgcgggtcgtttgattttaaaaagcattgcgatgagctggcaaaacacaaaggctgg
acgcgcgaagcgatatttttcatgcttcaggtgttttttgaactcggttttgttacactt
aagaatggaattacggaagtggcacaagcgccgagtaaacgtgacttgtcggaagcgcca
atttacaaacagcgtgaacagcaaattgcgcttgagcaaaagctcttgtatgcatcctat
aaagatttgaaagaatggttcgatacgaaactatcggccaaggaggaaaagatatggatt
taa
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