Planococcus shixiaomingii: QWY21_08100
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Entry
QWY21_08100 CDS
T10328
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QWY21_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_08100
Enzymes [BR:
pshx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QWY21_08100
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QWY21_08100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_28
nSTAND3
AAA_16
AAA_14
UvrD-helicase
TsaE
AAA
NPHP3_N
AAA_25
UvrD_C
SLFN-g3_helicase
AAA_5
NTPase_1
NACHT
AAA_17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WKA56293
LinkDB
All DBs
Position
1610122..1612521
Genome browser
AA seq
799 aa
AA seq
DB search
MAGQIDLFQEEVQFVLGRPVVSIFHNPDNLFTIAKVKIQQTNTSYEEKEIIVSGYFPKLS
MEEQYRFTGLVKNHPKYGVQFQVETFTKEVPETEQGIIHYLSSDMFNGIGRKTAETIVKK
LGKDAIKKILEDPEALDAVPRLSDDKKDNIRATLQMNLGLERVMIQLNDWGFGPQVGMRI
YQAYREETIDLLTKNPFRLIEEIEGIGFQRADELGAKLGITGSHPDRIKASVLHLLNQAS
LSEGHVYVDAKTLIPLVKQLLETSQREDISIEAISKAMIELNNEGKVAGEETRLYLPSLY
YSEVGIATKLETMLASQENRTRFPASEVRRALGEAEERLGVNYAETQIEAIDSSINSSVM
ILTGGPGTGKTTVVRGLVEVYAELHGLSLDPKEYAKKKEPFPIILAAPTGRAAKRLSEST
ELPAMTIHRLLGFNGQEKEEETEKEIEGRLIIIDEMSMVDTWLAHQLLKAVPEDAQIIFV
GDQDQLPPVGPGQVLRDMLDSKRIPTVELKDIYRQSSGSSIIELAHQMKNGQLPADITAK
TADRSFIKAGADQIPSVVEKVVKSALSKGHSIKDIQVLAPMYKGPAGIDALNRMIQEMVN
PNTDGKRKELVFGDITYRIGDKILQLVNQPESNVFNGDMGEVVAILKAKETVEKQDMLVA
SFDGIEVTYERSDLNQLTLAYCCSIHKAQGSEFPTVIMPVVRGYMKMLRRNLLYTGITRS
KDFLILCGDPSVFRFGVERTDDAKRMTTLKDRLARSEAEPVKEAAEEEVGPASLTADNAH
AIHPLIGMEGVTPRDFMEA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcaaatcgatttgtttcaagaagaagttcagtttgtgctgggacgaccggtc
gtttctatttttcacaatcccgataatttatttaccatcgcaaaagtgaaaatccaacaa
acaaacacctcgtacgaagaaaaagaaatcatcgtttccggctattttcctaagttgtcg
atggaagaacaataccgatttaccggtttggtcaaaaatcacccgaaatacggcgtccag
ttccaagtggagacatttacgaaagaagtgccggaaaccgaacaaggcatcatccattat
ttatcgagcgacatgtttaacggcattggccgcaaaaccgccgagacgattgttaaaaaa
ctcggcaaagacgccatcaaaaaaattctggaagacccggaagcactcgacgccgttccg
cggctttctgacgataaaaaagacaacatccgagcgacattgcaaatgaaccttggcctt
gagcgggtaatgatccaattgaacgattggggctttggcccgcaagtcggcatgcgcatt
tatcaggcataccgggaagaaaccatcgatctgctgacaaaaaatccgtttcgcctgatt
gaagaaatcgaaggcatcggtttccagcgggcggatgagcttggtgccaaactcggaatc
accggcagccaccctgaccgcatcaaagcgtcggttctgcatttgctgaaccaggcatcg
ctttctgaagggcatgtttatgttgatgcgaaaacgttgattccacttgtaaagcagctg
ctggaaacgagccagcgcgaagacatttcaatcgaggccatctcgaaagcaatgattgaa
ttgaataatgaaggcaaagtagcaggagaagaaacgcggctttatttgccttcgctgtat
tattctgaagtggggattgcgacaaaactggaaacgatgctcgcatcccaggaaaaccgc
acccggttcccagcatcggaagtgcggcgggcactcggcgaagcggaagaacgtctcggc
gtcaattatgccgagacgcaaatcgaagcgatcgattcgagcatcaattcatcagtgatg
atattgactggagggccggggacagggaaaacgactgttgtcaggggcttagtggaagtg
tatgcggaactgcatggcttgtcgcttgatccgaaagaatatgcaaagaaaaaagagccg
ttcccaatcattttggccgcaccgaccggacgcgctgcgaaacgcctgagcgaatcgact
gaactgccggcgatgaccattcaccggcttcttggctttaacggccaggaaaaagaagaa
gaaaccgaaaaagaaatcgaaggcaggctgattatcatcgatgaaatgtcgatggtcgac
acatggcttgcgcatcaactgttaaaagctgtacccgaagacgcccaaatcatttttgtc
ggcgaccaggaccagctgccgccagttgggccaggtcaagtgctccgcgacatgcttgat
tcaaaacgaatcccgacggtcgaactgaaagacatttaccggcaatcttccggttcatca
attatcgaactcgctcaccaaatgaagaatggccagcttccggcagatattactgctaaa
acggcagaccgctcgttcattaaagcgggagctgaccaaattccgtcagttgttgaaaaa
gtcgtgaaaagcgcattgagtaaaggccattccattaaagacatccaggtactggcgcca
atgtacaaagggccggcgggcatagatgccttgaaccggatgatccaggaaatggtcaac
ccgaataccgacggcaagcgaaaagaattggtgtttggcgacatcacgtaccgaatcggc
gacaagattctgcagctcgtcaaccagccggaaagcaatgtgttcaacggcgatatgggc
gaagttgtcgccattctgaaagcgaaagaaaccgtcgagaaacaagacatgcttgtggcg
tcgttcgacggcatcgaagtgacgtatgagcgcagcgacttgaaccaattgacgctcgcg
tattgctgctcgatccacaaagcgcaaggctcggaatttccgacggttattatgccggtt
gtccgcggctacatgaaaatgctgcgccgcaacctgctgtataccggcatcactcgaagc
aaagacttcttgattctgtgcggagacccgagcgtctttcgtttcggcgtggaacgcacc
gacgatgccaagcgcatgaccacgctgaaagaccgacttgcgagatcagaagcagaaccg
gttaaagaagctgccgaagaagaagttggacccgcgagcttaaccgccgataacgcccat
gcaatccacccgttgattggtatggaaggcgttacgccacgcgattttatggaggcatag
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