Planococcus shixiaomingii: QWY21_08225
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Entry
QWY21_08225 CDS
T10328
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03030
DNA replication
pshx03430
Mismatch repair
pshx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWY21_08225 (holA)
03430 Mismatch repair
QWY21_08225 (holA)
03440 Homologous recombination
QWY21_08225 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshx03032
]
QWY21_08225 (holA)
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_08225 (holA)
Enzymes [BR:
pshx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWY21_08225 (holA)
DNA replication proteins [BR:
pshx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWY21_08225 (holA)
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWY21_08225 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
MGS_C
Motif
Other DBs
NCBI-ProteinID:
WKA56317
LinkDB
All DBs
Position
1632708..1633742
Genome browser
AA seq
344 aa
AA seq
DB search
MITSIWKAIRNGQIDPVYLAVGTESYFIEKTVDLLKNKLTDGELELSIFDLDEVPVDRVI
EEADTIPFFSDRKLIIAKNASFLKAAERGKEKIEHDMKMLESWLENPPSSSVTIFIAPYE
KLDERKKVTKLIKQKSVLVEAKALQAQDLEVWIDHEARSFGKRIKKDAARKLVEMAGTNL
TLLSSEIEKMSLYLGAGEEEISEALVEQMTARTLEQDAFKMLQAYLDGDISSALSVYYDL
LRQKEEPVALTALLASQIRFMVHVFYLQKKGYHAQQISKQLKAHPYRVKLLVEKRQQIPE
KRLLEVLGDLADIDLQLKTVSGNRERILEFFLMKRNIRKNTGPI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgattacatcaatttggaaagcaatccgcaacgggcaaatcgaccctgtatacttagct
gtaggaacggaaagttattttatcgaaaaaacagtcgatttactaaaaaataaattaacg
gacggtgaactggaattgtccattttcgatttggatgaagttcctgtcgaccgggtgatc
gaggaagcggataccattccttttttcagtgaccgcaaactgatcatcgcgaaaaatgca
tctttcttaaaagcggctgagcggggaaaagagaaaatcgagcatgatatgaaaatgttg
gaatcttggctggaaaatccgccttctagcagcgttacaatttttatcgcaccatacgaa
aaactggatgagcggaaaaaagtgacaaagctgatcaaacaaaaatctgtactggtggaa
gcgaaagctttgcaggcccaagacttggaagtgtggattgatcacgaagccagaagtttc
gggaagcgcatcaaaaaagatgcggctcgaaagttggttgaaatggcaggcacaaatttg
actttattgtcatctgaaattgagaaaatgtccctttatttaggggcgggggaagaagag
atcagtgaggcgcttgtagagcagatgacagcccgtacactggaacaggacgctttcaag
atgctgcaggcttatttggatggcgatattagcagcgcgctgtcggtgtattatgattta
ttgcgccaaaaagaagagccggttgcactgacggcgctgttggcttcccaaatccgtttt
atggttcatgtgttttatttgcagaaaaaaggctaccatgctcagcaaatatccaagcaa
ttgaaagcccatccctatcgggtcaaacttttggtggaaaaacgccagcaaattccggag
aagcgcttgctcgaagtgcttggcgatttggccgatatcgatctgcagctgaaaacggtg
agcggcaacagggaacgcattttggaattctttttgatgaaacgcaatatacgaaaaaat
accggccccatttaa
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