Planococcus shixiaomingii: QWY21_08620
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Entry
QWY21_08620 CDS
T10328
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QWY21_08620 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_08620 (xseA)
Enzymes [BR:
pshx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QWY21_08620 (xseA)
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QWY21_08620 (xseA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
GPAT_C
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WKA56396
LinkDB
All DBs
Position
1709838..1711190
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AA seq
450 aa
AA seq
DB search
MSTDPYLSVKALTKYIKKKFDADPHLRDVYVKGELSNVKIHTSGHIYFTLKDNAARLPAV
MFAANARSVKFKPESGMTVLIRGDVTVYEASGQYQLYAQSMQSDGIGDYYLAFEQLKEKL
AKEGLFNAAHKKRFPRFPKKIAVITAQTGAAVRDIIITLNRRYPLAKVVLYPTLVQGTGA
APSIVKSIQTANQGDYDVMIVGRGGGSIEDLWAFNEESVARAIFESRIPVISAIGHETDT
TIADFVSDLRAATPTAAAELAVPSKTELLDRVLSYQSGMYRTIANVISKDKAALNRLTSS
FPLAYPDRLYRPFIERIERATESLQRETVQQLNRSKERHSNLNNQLQSRVPLKRIKQSEM
DIDNLSRRLNQGMDRSLRNNSQQLGSAMRTLDALSPLKIMDRGYSIPYKNGEVVKSISQV
AKGDQIAISMTDGTVNATVEDTIPTSKGDS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgacccatacttaagcgttaaggcgctgacaaaatacataaaaaagaaattc
gatgccgatccccacttaagggacgtttacgtcaaaggggaattatcgaacgtcaagatc
catacgagcggccatatttatttcacgttgaaagacaatgctgcgcggcttccggccgtc
atgtttgcggcaaatgccagatcagtgaaattcaaaccggaaagcgggatgaccgtattg
atccgaggggacgttacggtttatgaagcttccggccaataccagctctatgcccagtcg
atgcaatcggacggcatcggcgattattatttggcgtttgaacaactgaaagaaaaattg
gccaaagagggcttgttcaatgcggctcataaaaagcgctttccgcgtttcccgaaaaag
atcgcggtgattaccgcgcaaacaggagctgcggtacgggatattatcattacccttaac
cgccgttatccgcttgcaaaagttgttttgtatccgacgctggtacaaggtacaggagca
gcgccgtcaatcgtcaagtcgattcaaacagccaatcaaggcgattacgatgtcatgatt
gtcgggcgcggaggcggatcgatcgaagatttatgggcattcaatgaagaaagtgtggca
cgcgccatcttcgaatcgcgcatcccggtcatctcggctattggtcatgaaaccgatacg
acaatcgccgattttgtgtcggacttgcgggcagccacaccaacagcggccgcagaactg
gcagtaccgagcaagacagaattgctggaccgcgtgttgagctaccagtccggcatgtac
cggacgatcgcgaatgtcatttcaaaagataaagcggccttgaaccgtttgacatcttca
ttcccgctcgcttatccagaccgtctgtacaggccgttcatcgaacgcatcgagcgggca
accgagtcgctgcagcgagaaacagtccagcagctgaaccgttcgaaagagcgccattcc
aacttaaacaatcaattgcaaagccgggttccgttaaaacgcatcaagcaatccgaaatg
gacatcgacaatttatcgcgccgcttgaatcaaggaatggaccgcagcttgagaaacaac
tcacagcagcttggttccgcgatgcgtacacttgacgccttgagcccattgaaaatcatg
gaccgcggctattccattccctataaaaacggtgaagtcgtaaaaagcatttcgcaagta
gcaaaaggggaccagatcgccatttccatgacggatggtactgtgaatgccactgtagaa
gatacgatcccaacgagtaaaggagattcataa
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