Planococcus shixiaomingii: QWY21_11450
Help
Entry
QWY21_11450 CDS
T10328
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pshx Planococcus shixiaomingii
Pathway
pshx00300
Lysine biosynthesis
pshx00470
D-Amino acid metabolism
pshx01100
Metabolic pathways
pshx01110
Biosynthesis of secondary metabolites
pshx01120
Microbial metabolism in diverse environments
pshx01230
Biosynthesis of amino acids
Module
pshx_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QWY21_11450 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QWY21_11450 (dapF)
Enzymes [BR:
pshx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QWY21_11450 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WKA53276
LinkDB
All DBs
Position
complement(2290726..2291682)
Genome browser
AA seq
318 aa
AA seq
DB search
MDLTLLKVHGSMNTFYLVEGPERDDYNELALRLTALDSEADGLLVVLPSLQADAKMRVFN
RDGSEASMCGNGLRCVARFVCERQGIEEAVIETMKALLKVKKEKTLQDGIARYSVEISPV
SFKLKDLPMVYEDNDEWLLKPLPFLSDDIVFSAVAVPNPHLIGLVPAAYQNDQSHQQKWA
EFFNGPNDYFSDGVNVSYVTKVEEGIFVRTFERGVGFTNACGTAMTASALISCMAGLVPF
GNVNVYNPGGMVQCQVEKKGEEIRLLLTGNATVLSVHRFQWENEVEDSGFKSVTELEEQV
LYEKFIEQTSSISDQFAQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggacttaactcttctaaaagtacacggctccatgaacacattttatttggttgaaggc
ccggaacgcgatgattataacgagctcgccttgcggttaacagcccttgattcggaagct
gatggattgctcgtcgttttgccatcccttcaggccgatgcaaaaatgcgtgtctttaac
cgcgacggttcagaggcctcgatgtgcggcaatgggctccgctgtgtggcgcgctttgtc
tgtgaacggcagggaattgaggaagctgttatcgaaacgatgaaagcacttctgaaagtg
aaaaaagagaagacgttgcaggacggaattgcacgctattccgttgaaatctccccggta
tcatttaaactaaaagatttgccgatggtctatgaggacaatgacgaatggttgttgaag
ccattgccattcctttcagacgatatcgttttctcggccgtagccgtacccaacccgcat
ttgattggactggtcccggcggcataccaaaacgatcaaagtcatcagcaaaaatgggcg
gaattttttaatggaccgaacgattatttttcagatggcgtcaacgtcagctacgtgacc
aaagtagaggaaggcatttttgtccggacgtttgaacgcggcgtcggtttcaccaatgcg
tgcggcacagcaatgactgcgtcagcgttgatcagctgtatggcgggtctcgttccgttc
ggcaatgtcaatgtgtacaatccgggaggcatggtccagtgccaagtggagaaaaaaggg
gaagagattcgtttgttattgacgggcaacgcaaccgttttatccgttcaccgtttccag
tgggaaaacgaggtagaggacagcggatttaaatcagtcacggaactggaagagcaggtt
ttgtacgaaaagtttatcgaacagacatcttccatatccgaccaatttgcacagtag
DBGET
integrated database retrieval system